RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 AEBP2Q6ZN18 517 aaPredicted RBP9.65□□□□□ -0.86
SNORD3E-202ENST00000627253 CHIC1Q5VXU3 224 aa9□□□□□ -0.97
SNORD3E-202ENST00000627253 SENP3Q9H4L4 574 aaPredicted RBP8.05□□□□□ -1.12
SNORD3E-202ENST00000627253 PHF23Q9BUL5 403 aaPredicted RBP8.01□□□□□ -1.13
SNORD3E-202ENST00000627253 FOXD1Q16676 465 aa7.64□□□□□ -1.19
SNORD3E-202ENST00000627253 PPP6R1Q9UPN7 881 aa7.16□□□□□ -1.26
SNORD3E-202ENST00000627253 PLPPR3Q6T4P5 718 aa7.08□□□□□ -1.28
SNORD3E-202ENST00000627253 POTEDQ86YR6 584 aa7.08□□□□□ -1.28
SNORD3E-202ENST00000627253 ADRA2BP18089 450 aa7.07□□□□□ -1.28
SNORD3E-202ENST00000627253 MSH5O43196 834 aa7.02□□□□□ -1.29
SNORD3E-202ENST00000627253 PIAS4Q8N2W9 510 aaPredicted RBP7.02□□□□□ -1.29
SNORD3E-202ENST00000627253 MAPK8IP2Q13387 824 aaPredicted RBP6.54□□□□□ -1.36
SNORD3E-202ENST00000627253 DMRT2Q9Y5R5 561 aa6.44□□□□□ -1.38
SNORD3E-202ENST00000627253 SCAF1Q9H7N4 1312 aaKnown RBP6.26□□□□□ -1.41
SNORD3E-202ENST00000627253 PPP4R3CPQ6ZMV5 832 aa6.25□□□□□ -1.41
SNORD3E-202ENST00000627253 HOXD11P31277 338 aaPredicted RBP6.2□□□□□ -1.42
SNORD3E-202ENST00000627253 CNKSR2Q8WXI2 1034 aa6.11□□□□□ -1.43
SNORD3E-202ENST00000627253 RNF216Q9NWF9 866 aaPredicted RBP6.09□□□□□ -1.43
SNORD3E-202ENST00000627253 RNF39Q9H2S5 420 aa6.08□□□□□ -1.44
SNORD3E-202ENST00000627253 DCAF8L1A6NGE4 600 aa6.06□□□□□ -1.44
SNORD3E-202ENST00000627253 CACNB1Q02641 598 aaPredicted RBP6.06□□□□□ -1.44
SNORD3E-202ENST00000627253 NPM3O75607 178 aaKnown RBP5.94□□□□□ -1.46
SNORD3E-202ENST00000627253 DNAJC5BQ9UF47 199 aa5.93□□□□□ -1.46
SNORD3E-202ENST00000627253 C1QBPQ07021 282 aaKnown RBP5.91□□□□□ -1.46
SNORD3E-202ENST00000627253 NCBP3Q53F19 620 aaKnown RBP5.86□□□□□ -1.47
SNORD3E-202ENST00000627253 KCNA4P22459 653 aa5.8□□□□□ -1.48
SNORD3E-202ENST00000627253 U3KPZ7 1027 aaPredicted RBP5.8□□□□□ -1.48
SNORD3E-202ENST00000627253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNORD3E-202ENST00000627253 SLC4A2P04920 1241 aa5.75□□□□□ -1.49
SNORD3E-202ENST00000627253 SPINK5Q9NQ38 1064 aaPredicted RBP5.73□□□□□ -1.49
SNORD3E-202ENST00000627253 DSG3P32926 999 aa5.68□□□□□ -1.5
SNORD3E-202ENST00000627253 CAPN15O75808 1086 aa5.6□□□□□ -1.51
SNORD3E-202ENST00000627253 ABCB7O75027 752 aa5.53□□□□□ -1.52
SNORD3E-202ENST00000627253 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
SNORD3E-202ENST00000627253 POTEHQ6S545 545 aa5.49□□□□□ -1.53
SNORD3E-202ENST00000627253 ZNF219Q9P2Y4 722 aaPredicted RBP5.47□□□□□ -1.53
SNORD3E-202ENST00000627253 ATF5Q9Y2D1 282 aaPredicted RBP5.46□□□□□ -1.54
SNORD3E-202ENST00000627253 SAMD1Q6SPF0 538 aaPredicted RBP5.42□□□□□ -1.54
SNORD3E-202ENST00000627253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 ZBTB22O15209 634 aa5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 MYCNP04198 464 aaPredicted RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 HNRNPUL2Q1KMD3 747 aaKnown RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 POLA2Q14181 598 aa5.38□□□□□ -1.55
SNORD3E-202ENST00000627253 APLP2Q06481 763 aa5.37□□□□□ -1.55
SNORD3E-202ENST00000627253 SLC4A1APQ9BWU0 796 aaKnown RBP5.37□□□□□ -1.55
SNORD3E-202ENST00000627253 FOXD4L1Q9NU39 408 aa5.34□□□□□ -1.55
SNORD3E-202ENST00000627253 CHRDL2Q6WN34 429 aa5.27□□□□□ -1.57
SNORD3E-202ENST00000627253 RBM42Q9BTD8 480 aaKnown RBP5.27□□□□□ -1.57
SNORD3E-202ENST00000627253 OSCARQ8IYS5 282 aa5.25□□□□□ -1.57
SNORD3E-202ENST00000627253 REM2Q8IYK8 340 aaPredicted RBP5.21□□□□□ -1.58
SNORD3E-202ENST00000627253 AKT1S1Q96B36 256 aa5.2□□□□□ -1.58
SNORD3E-202ENST00000627253 MKRN4PQ13434 485 aaPredicted RBP5.18□□□□□ -1.58
SNORD3E-202ENST00000627253 PIP4P2Q8N4L2 257 aa5.18□□□□□ -1.58
SNORD3E-202ENST00000627253 PITPNM1O00562 1244 aa5.17□□□□□ -1.58
SNORD3E-202ENST00000627253 ATXN8OSP0DMR3 200 aa5.16□□□□□ -1.58
SNORD3E-202ENST00000627253 ZBTB12Q9Y330 459 aaPredicted RBP5.15□□□□□ -1.59
SNORD3E-202ENST00000627253 FXR2P51116 673 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNORD3E-202ENST00000627253 EVX2Q03828 476 aa5.13□□□□□ -1.59
SNORD3E-202ENST00000627253 SP7Q8TDD2 431 aaPredicted RBP5.11□□□□□ -1.59
SNORD3E-202ENST00000627253 SSUH2Q9Y2M2 353 aa5.07□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE2BA6NHP3 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE6P0CI01 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE2Q495Y8 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 CSRNP3Q8WYN3 585 aa5.05□□□□□ -1.6
SNORD3E-202ENST00000627253 HAX1O00165 279 aa5.01□□□□□ -1.61
SNORD3E-202ENST00000627253 FBLN2P98095 1184 aa5.01□□□□□ -1.61
SNORD3E-202ENST00000627253 PRKAR2AP13861 404 aaKnown RBP4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 EHMT2Q96KQ7 1210 aa4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 ZNF692Q9BU19 519 aaPredicted RBP4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 C19orf67A6NJJ6 358 aa4.97□□□□□ -1.61
SNORD3E-202ENST00000627253 CHADLQ6NUI6 762 aa4.97□□□□□ -1.61
SNORD3E-202ENST00000627253 SPDYE1Q8NFV5 336 aaPredicted RBP4.96□□□□□ -1.62
SNORD3E-202ENST00000627253 CLEC11AQ9Y240 323 aa4.96□□□□□ -1.62
SNORD3E-202ENST00000627253 PABPN1Q86U42 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
SNORD3E-202ENST00000627253 GABBR2O75899 941 aa4.9□□□□□ -1.63
SNORD3E-202ENST00000627253 POTEIP0CG38 1075 aa4.9□□□□□ -1.63
SNORD3E-202ENST00000627253 PRR29P0C7W0 189 aa4.86□□□□□ -1.63
SNORD3E-202ENST00000627253 CREBZFQ9NS37 354 aa4.85□□□□□ -1.63
SNORD3E-202ENST00000627253 FARP1Q9Y4F1 1045 aaPredicted RBP4.85□□□□□ -1.63
SNORD3E-202ENST00000627253 CD44P16070 742 aaKnown RBP4.82□□□□□ -1.64
SNORD3E-202ENST00000627253 MNX1P50219 401 aaPredicted RBP4.81□□□□□ -1.64
SNORD3E-202ENST00000627253 SPDYE4A6NLX3 237 aa4.78□□□□□ -1.64
SNORD3E-202ENST00000627253 LHX8Q68G74 356 aa4.78□□□□□ -1.64
SNORD3E-202ENST00000627253 PROM2Q8N271 834 aa4.77□□□□□ -1.65
SNORD3E-202ENST00000627253 ZNF579Q8NAF0 562 aaKnown RBP4.77□□□□□ -1.65
SNORD3E-202ENST00000627253 GALR2O43603 387 aaPredicted RBP4.76□□□□□ -1.65
SNORD3E-202ENST00000627253 POTEB2H3BUK9 544 aa4.74□□□□□ -1.65
SNORD3E-202ENST00000627253 PHF12Q96QT6 1004 aa4.73□□□□□ -1.65
SNORD3E-202ENST00000627253 ZRANB1Q9UGI0 708 aa4.73□□□□□ -1.65
SNORD3E-202ENST00000627253 PELP1Q8IZL8 1130 aaKnown RBP4.72□□□□□ -1.65
SNORD3E-202ENST00000627253 POTEJP0CG39 1038 aa4.69□□□□□ -1.66
SNORD3E-202ENST00000627253 STAG3Q9UJ98 1225 aa4.69□□□□□ -1.66
SNORD3E-202ENST00000627253 OTUD5Q96G74 571 aa4.68□□□□□ -1.66
SNORD3E-202ENST00000627253 CLCN6P51797 869 aa4.66□□□□□ -1.66
SNORD3E-202ENST00000627253 MS4A3Q96HJ5 214 aa4.66□□□□□ -1.66
SNORD3E-202ENST00000627253 TRPC6Q9Y210 931 aa4.65□□□□□ -1.67
SNORD3E-202ENST00000627253 CCDC61Q9Y6R9 512 aa4.65□□□□□ -1.67
SNORD3E-202ENST00000627253 DCBLD2Q96PD2 775 aa4.64□□□□□ -1.67
SNORD3E-202ENST00000627253 PLSCR2Q9NRY7 297 aa4.64□□□□□ -1.67
SNORD3E-202ENST00000627253 POTEFA5A3E0 1075 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms