RNA–Protein interactions for RNA: ENST00000626589.2

UBE3A-212, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-212ENST00000626589 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
UBE3A-212ENST00000626589 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
UBE3A-212ENST00000626589 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
UBE3A-212ENST00000626589 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
UBE3A-212ENST00000626589 FOXD1Q16676 465 aa17.14■□□□□ 0.33
UBE3A-212ENST00000626589 MSH5O43196 834 aa16.24■□□□□ 0.19
UBE3A-212ENST00000626589 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
UBE3A-212ENST00000626589 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
UBE3A-212ENST00000626589 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
UBE3A-212ENST00000626589 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
UBE3A-212ENST00000626589 ADRA2BP18089 450 aa15.81■□□□□ 0.12
UBE3A-212ENST00000626589 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
UBE3A-212ENST00000626589 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
UBE3A-212ENST00000626589 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
UBE3A-212ENST00000626589 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
UBE3A-212ENST00000626589 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
UBE3A-212ENST00000626589 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
UBE3A-212ENST00000626589 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
UBE3A-212ENST00000626589 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
UBE3A-212ENST00000626589 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
UBE3A-212ENST00000626589 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
UBE3A-212ENST00000626589 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
UBE3A-212ENST00000626589 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
UBE3A-212ENST00000626589 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
UBE3A-212ENST00000626589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBE3A-212ENST00000626589 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
UBE3A-212ENST00000626589 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
UBE3A-212ENST00000626589 CAPN15O75808 1086 aa12.88□□□□□ -0.35
UBE3A-212ENST00000626589 KCNA4P22459 653 aa12.88□□□□□ -0.35
UBE3A-212ENST00000626589 DSG3P32926 999 aa12.82□□□□□ -0.36
UBE3A-212ENST00000626589 APLP2Q06481 763 aa12.82□□□□□ -0.36
UBE3A-212ENST00000626589 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
UBE3A-212ENST00000626589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-212ENST00000626589 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
UBE3A-212ENST00000626589 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
UBE3A-212ENST00000626589 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
UBE3A-212ENST00000626589 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
UBE3A-212ENST00000626589 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
UBE3A-212ENST00000626589 POTEHQ6S545 545 aa12.55□□□□□ -0.4
UBE3A-212ENST00000626589 ABCB7O75027 752 aa12.49□□□□□ -0.41
UBE3A-212ENST00000626589 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
UBE3A-212ENST00000626589 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
UBE3A-212ENST00000626589 POLA2Q14181 598 aa12.25□□□□□ -0.45
UBE3A-212ENST00000626589 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
UBE3A-212ENST00000626589 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
UBE3A-212ENST00000626589 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-212ENST00000626589 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
UBE3A-212ENST00000626589 AKT1S1Q96B36 256 aa12□□□□□ -0.49
UBE3A-212ENST00000626589 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
UBE3A-212ENST00000626589 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
UBE3A-212ENST00000626589 REM2Q8IYK8 340 aaPredicted RBP11.83□□□□□ -0.52
UBE3A-212ENST00000626589 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
UBE3A-212ENST00000626589 ZBTB22O15209 634 aa11.78□□□□□ -0.52
UBE3A-212ENST00000626589 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
UBE3A-212ENST00000626589 FBLN2P98095 1184 aa11.71□□□□□ -0.53
UBE3A-212ENST00000626589 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-212ENST00000626589 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
UBE3A-212ENST00000626589 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
UBE3A-212ENST00000626589 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
UBE3A-212ENST00000626589 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
UBE3A-212ENST00000626589 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE3A-212ENST00000626589 HAX1O00165 279 aa11.58□□□□□ -0.56
UBE3A-212ENST00000626589 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
UBE3A-212ENST00000626589 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
UBE3A-212ENST00000626589 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
UBE3A-212ENST00000626589 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
UBE3A-212ENST00000626589 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
UBE3A-212ENST00000626589 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
UBE3A-212ENST00000626589 EVX2Q03828 476 aa11.3□□□□□ -0.6
UBE3A-212ENST00000626589 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
UBE3A-212ENST00000626589 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
UBE3A-212ENST00000626589 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
UBE3A-212ENST00000626589 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
UBE3A-212ENST00000626589 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
UBE3A-212ENST00000626589 GABBR2O75899 941 aa11.13□□□□□ -0.63
UBE3A-212ENST00000626589 CLCN6P51797 869 aa11.09□□□□□ -0.63
UBE3A-212ENST00000626589 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
UBE3A-212ENST00000626589 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
UBE3A-212ENST00000626589 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
UBE3A-212ENST00000626589 LHX8Q68G74 356 aa10.97□□□□□ -0.65
UBE3A-212ENST00000626589 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
UBE3A-212ENST00000626589 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
UBE3A-212ENST00000626589 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
UBE3A-212ENST00000626589 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
UBE3A-212ENST00000626589 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
UBE3A-212ENST00000626589 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
UBE3A-212ENST00000626589 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
UBE3A-212ENST00000626589 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
UBE3A-212ENST00000626589 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBE3A-212ENST00000626589 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
UBE3A-212ENST00000626589 MNX1P50219 401 aaPredicted RBP10.66□□□□□ -0.7
UBE3A-212ENST00000626589 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
UBE3A-212ENST00000626589 PROM2Q8N271 834 aa10.61□□□□□ -0.71
UBE3A-212ENST00000626589 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
UBE3A-212ENST00000626589 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
UBE3A-212ENST00000626589 C7P10643 843 aa10.5□□□□□ -0.73
UBE3A-212ENST00000626589 SLC39A7Q92504 469 aa10.5□□□□□ -0.73
UBE3A-212ENST00000626589 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
UBE3A-212ENST00000626589 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
UBE3A-212ENST00000626589 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms