RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
CDR1-202ENST00000625883 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
CDR1-202ENST00000625883 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
CDR1-202ENST00000625883 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
CDR1-202ENST00000625883 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
CDR1-202ENST00000625883 FOXD1Q16676 465 aa15.14■□□□□ 0.01
CDR1-202ENST00000625883 ADRA2BP18089 450 aa14.48□□□□□ -0.09
CDR1-202ENST00000625883 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
CDR1-202ENST00000625883 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
CDR1-202ENST00000625883 MSH5O43196 834 aa14.14□□□□□ -0.15
CDR1-202ENST00000625883 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
CDR1-202ENST00000625883 KCNA4P22459 653 aa13.55□□□□□ -0.24
CDR1-202ENST00000625883 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
CDR1-202ENST00000625883 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
CDR1-202ENST00000625883 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
CDR1-202ENST00000625883 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
CDR1-202ENST00000625883 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
CDR1-202ENST00000625883 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
CDR1-202ENST00000625883 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
CDR1-202ENST00000625883 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
CDR1-202ENST00000625883 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
CDR1-202ENST00000625883 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
CDR1-202ENST00000625883 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
CDR1-202ENST00000625883 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.38
CDR1-202ENST00000625883 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
CDR1-202ENST00000625883 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
CDR1-202ENST00000625883 ZBTB22O15209 634 aa12.52□□□□□ -0.41
CDR1-202ENST00000625883 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CDR1-202ENST00000625883 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
CDR1-202ENST00000625883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDR1-202ENST00000625883 RNF39Q9H2S5 420 aa12.02□□□□□ -0.48
CDR1-202ENST00000625883 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
CDR1-202ENST00000625883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
CDR1-202ENST00000625883 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
CDR1-202ENST00000625883 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
CDR1-202ENST00000625883 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
CDR1-202ENST00000625883 APLP2Q06481 763 aa11.89□□□□□ -0.51
CDR1-202ENST00000625883 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
CDR1-202ENST00000625883 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
CDR1-202ENST00000625883 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
CDR1-202ENST00000625883 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
CDR1-202ENST00000625883 CAPN15O75808 1086 aa11.64□□□□□ -0.55
CDR1-202ENST00000625883 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
CDR1-202ENST00000625883 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
CDR1-202ENST00000625883 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
CDR1-202ENST00000625883 FKBP8Q14318 412 aa11.44□□□□□ -0.58
CDR1-202ENST00000625883 DSG3P32926 999 aa11.4□□□□□ -0.58
CDR1-202ENST00000625883 ABCB7O75027 752 aa11.34□□□□□ -0.59
CDR1-202ENST00000625883 POLA2Q14181 598 aa11.33□□□□□ -0.6
CDR1-202ENST00000625883 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CDR1-202ENST00000625883 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CDR1-202ENST00000625883 FBLN2P98095 1184 aa11.19□□□□□ -0.62
CDR1-202ENST00000625883 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
CDR1-202ENST00000625883 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
CDR1-202ENST00000625883 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
CDR1-202ENST00000625883 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
CDR1-202ENST00000625883 PROM2Q8N271 834 aa10.99□□□□□ -0.65
CDR1-202ENST00000625883 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
CDR1-202ENST00000625883 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
CDR1-202ENST00000625883 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
CDR1-202ENST00000625883 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
CDR1-202ENST00000625883 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
CDR1-202ENST00000625883 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
CDR1-202ENST00000625883 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
CDR1-202ENST00000625883 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
CDR1-202ENST00000625883 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
CDR1-202ENST00000625883 POTEHQ6S545 545 aa10.69□□□□□ -0.7
CDR1-202ENST00000625883 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
CDR1-202ENST00000625883 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDR1-202ENST00000625883 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
CDR1-202ENST00000625883 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
CDR1-202ENST00000625883 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
CDR1-202ENST00000625883 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
CDR1-202ENST00000625883 CLEC11AQ9Y240 323 aa10.52□□□□□ -0.73
CDR1-202ENST00000625883 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
CDR1-202ENST00000625883 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
CDR1-202ENST00000625883 PKD2Q13563 968 aa10.47□□□□□ -0.73
CDR1-202ENST00000625883 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
CDR1-202ENST00000625883 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.74
CDR1-202ENST00000625883 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
CDR1-202ENST00000625883 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
CDR1-202ENST00000625883 MIER1Q8N108 512 aa10.43□□□□□ -0.74
CDR1-202ENST00000625883 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
CDR1-202ENST00000625883 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDR1-202ENST00000625883 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
CDR1-202ENST00000625883 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
CDR1-202ENST00000625883 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
CDR1-202ENST00000625883 DCAF8L2P0C7V8 631 aa10.29□□□□□ -0.76
CDR1-202ENST00000625883 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
CDR1-202ENST00000625883 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
CDR1-202ENST00000625883 RGL2O15211 777 aa10.22□□□□□ -0.77
CDR1-202ENST00000625883 PLCB2Q00722 1185 aa10.21□□□□□ -0.78
CDR1-202ENST00000625883 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.78
CDR1-202ENST00000625883 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDR1-202ENST00000625883 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
CDR1-202ENST00000625883 NUBP1P53384 320 aa10.18□□□□□ -0.78
CDR1-202ENST00000625883 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
CDR1-202ENST00000625883 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
CDR1-202ENST00000625883 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
CDR1-202ENST00000625883 GSE1Q14687 1217 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms