RNA–Protein interactions for RNA: ENST00000623016.1

AC004009.2-201, humanhuman

BASIC

Gene AC004009.2, Length 728 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.2-201ENST00000623016 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
AC004009.2-201ENST00000623016 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
AC004009.2-201ENST00000623016 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
AC004009.2-201ENST00000623016 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
AC004009.2-201ENST00000623016 FOXD1Q16676 465 aa21.05■□□□□ 0.96
AC004009.2-201ENST00000623016 MSH5O43196 834 aa19.77■□□□□ 0.76
AC004009.2-201ENST00000623016 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
AC004009.2-201ENST00000623016 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
AC004009.2-201ENST00000623016 PIAS4Q8N2W9 510 aaPredicted RBP19.64■□□□□ 0.73
AC004009.2-201ENST00000623016 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
AC004009.2-201ENST00000623016 ADRA2BP18089 450 aa19.47■□□□□ 0.71
AC004009.2-201ENST00000623016 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
AC004009.2-201ENST00000623016 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
AC004009.2-201ENST00000623016 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
AC004009.2-201ENST00000623016 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
AC004009.2-201ENST00000623016 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
AC004009.2-201ENST00000623016 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
AC004009.2-201ENST00000623016 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
AC004009.2-201ENST00000623016 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
AC004009.2-201ENST00000623016 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
AC004009.2-201ENST00000623016 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
AC004009.2-201ENST00000623016 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
AC004009.2-201ENST00000623016 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
AC004009.2-201ENST00000623016 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
AC004009.2-201ENST00000623016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
AC004009.2-201ENST00000623016 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
AC004009.2-201ENST00000623016 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
AC004009.2-201ENST00000623016 KCNA4P22459 653 aa15.85■□□□□ 0.13
AC004009.2-201ENST00000623016 CAPN15O75808 1086 aa15.8■□□□□ 0.12
AC004009.2-201ENST00000623016 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
AC004009.2-201ENST00000623016 DSG3P32926 999 aa15.71■□□□□ 0.11
AC004009.2-201ENST00000623016 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
AC004009.2-201ENST00000623016 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
AC004009.2-201ENST00000623016 APLP2Q06481 763 aa15.46■□□□□ 0.07
AC004009.2-201ENST00000623016 ABCB7O75027 752 aa15.43■□□□□ 0.06
AC004009.2-201ENST00000623016 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
AC004009.2-201ENST00000623016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
AC004009.2-201ENST00000623016 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
AC004009.2-201ENST00000623016 POTEHQ6S545 545 aa15.39■□□□□ 0.05
AC004009.2-201ENST00000623016 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
AC004009.2-201ENST00000623016 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
AC004009.2-201ENST00000623016 POLA2Q14181 598 aa15.02■□□□□ -0
AC004009.2-201ENST00000623016 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
AC004009.2-201ENST00000623016 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
AC004009.2-201ENST00000623016 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
AC004009.2-201ENST00000623016 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
AC004009.2-201ENST00000623016 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
AC004009.2-201ENST00000623016 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
AC004009.2-201ENST00000623016 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
AC004009.2-201ENST00000623016 ZBTB22O15209 634 aa14.55□□□□□ -0.08
AC004009.2-201ENST00000623016 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
AC004009.2-201ENST00000623016 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
AC004009.2-201ENST00000623016 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
AC004009.2-201ENST00000623016 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
AC004009.2-201ENST00000623016 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
AC004009.2-201ENST00000623016 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
AC004009.2-201ENST00000623016 FBLN2P98095 1184 aa14.24□□□□□ -0.13
AC004009.2-201ENST00000623016 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
AC004009.2-201ENST00000623016 HAX1O00165 279 aa14.21□□□□□ -0.13
AC004009.2-201ENST00000623016 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
AC004009.2-201ENST00000623016 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
AC004009.2-201ENST00000623016 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
AC004009.2-201ENST00000623016 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
AC004009.2-201ENST00000623016 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
AC004009.2-201ENST00000623016 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
AC004009.2-201ENST00000623016 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
AC004009.2-201ENST00000623016 EVX2Q03828 476 aa13.99□□□□□ -0.17
AC004009.2-201ENST00000623016 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
AC004009.2-201ENST00000623016 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
AC004009.2-201ENST00000623016 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC004009.2-201ENST00000623016 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
AC004009.2-201ENST00000623016 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
AC004009.2-201ENST00000623016 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
AC004009.2-201ENST00000623016 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
AC004009.2-201ENST00000623016 GABBR2O75899 941 aa13.66□□□□□ -0.22
AC004009.2-201ENST00000623016 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
AC004009.2-201ENST00000623016 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
AC004009.2-201ENST00000623016 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
AC004009.2-201ENST00000623016 LHX8Q68G74 356 aa13.44□□□□□ -0.26
AC004009.2-201ENST00000623016 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
AC004009.2-201ENST00000623016 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
AC004009.2-201ENST00000623016 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
AC004009.2-201ENST00000623016 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
AC004009.2-201ENST00000623016 CLCN6P51797 869 aa13.31□□□□□ -0.28
AC004009.2-201ENST00000623016 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
AC004009.2-201ENST00000623016 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
AC004009.2-201ENST00000623016 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
AC004009.2-201ENST00000623016 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
AC004009.2-201ENST00000623016 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
AC004009.2-201ENST00000623016 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
AC004009.2-201ENST00000623016 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC004009.2-201ENST00000623016 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
AC004009.2-201ENST00000623016 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
AC004009.2-201ENST00000623016 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
AC004009.2-201ENST00000623016 PROM2Q8N271 834 aa12.91□□□□□ -0.34
AC004009.2-201ENST00000623016 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
AC004009.2-201ENST00000623016 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
AC004009.2-201ENST00000623016 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
AC004009.2-201ENST00000623016 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
AC004009.2-201ENST00000623016 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms