RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
TP53-227ENST00000622645 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
TP53-227ENST00000622645 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
TP53-227ENST00000622645 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
TP53-227ENST00000622645 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
TP53-227ENST00000622645 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
TP53-227ENST00000622645 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
TP53-227ENST00000622645 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
TP53-227ENST00000622645 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
TP53-227ENST00000622645 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
TP53-227ENST00000622645 ABCC9O60706 1549 aa20.18■□□□□ 0.82
TP53-227ENST00000622645 NACADO15069 1562 aa19.99■□□□□ 0.79
TP53-227ENST00000622645 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
TP53-227ENST00000622645 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
TP53-227ENST00000622645 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
TP53-227ENST00000622645 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
TP53-227ENST00000622645 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
TP53-227ENST00000622645 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
TP53-227ENST00000622645 WIZO95785 1651 aa19.54■□□□□ 0.72
TP53-227ENST00000622645 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
TP53-227ENST00000622645 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
TP53-227ENST00000622645 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
TP53-227ENST00000622645 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
TP53-227ENST00000622645 HRCP23327 699 aa19.36■□□□□ 0.69
TP53-227ENST00000622645 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
TP53-227ENST00000622645 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
TP53-227ENST00000622645 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
TP53-227ENST00000622645 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
TP53-227ENST00000622645 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
TP53-227ENST00000622645 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
TP53-227ENST00000622645 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
TP53-227ENST00000622645 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
TP53-227ENST00000622645 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
TP53-227ENST00000622645 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
TP53-227ENST00000622645 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.63
TP53-227ENST00000622645 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
TP53-227ENST00000622645 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
TP53-227ENST00000622645 SOGA1O94964 1423 aa18.87■□□□□ 0.61
TP53-227ENST00000622645 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
TP53-227ENST00000622645 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
TP53-227ENST00000622645 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
TP53-227ENST00000622645 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
TP53-227ENST00000622645 EEA1Q15075 1411 aa18.7■□□□□ 0.58
TP53-227ENST00000622645 CEP162Q5TB80 1403 aa18.68■□□□□ 0.58
TP53-227ENST00000622645 UBTFP17480 764 aaKnown RBP18.67■□□□□ 0.58
TP53-227ENST00000622645 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
TP53-227ENST00000622645 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
TP53-227ENST00000622645 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
TP53-227ENST00000622645 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
TP53-227ENST00000622645 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
TP53-227ENST00000622645 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
TP53-227ENST00000622645 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
TP53-227ENST00000622645 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
TP53-227ENST00000622645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
TP53-227ENST00000622645 KIF21BO75037 1637 aa18.44■□□□□ 0.54
TP53-227ENST00000622645 TOP2BQ02880 1626 aa18.44■□□□□ 0.54
TP53-227ENST00000622645 RAPGEF2Q9Y4G8 1499 aa18.4■□□□□ 0.54
TP53-227ENST00000622645 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
TP53-227ENST00000622645 CLIP1P30622 1438 aa18.38■□□□□ 0.53
TP53-227ENST00000622645 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
TP53-227ENST00000622645 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
TP53-227ENST00000622645 CFTRP13569 1480 aa18.33■□□□□ 0.53
TP53-227ENST00000622645 CUX1P39880 1505 aa18.32■□□□□ 0.52
TP53-227ENST00000622645 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
TP53-227ENST00000622645 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
TP53-227ENST00000622645 KIF27Q86VH2 1401 aa18.21■□□□□ 0.5
TP53-227ENST00000622645 APLP2Q06481 763 aa18.2■□□□□ 0.5
TP53-227ENST00000622645 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
TP53-227ENST00000622645 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
TP53-227ENST00000622645 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
TP53-227ENST00000622645 CC2D2AQ9P2K1 1620 aa18.14■□□□□ 0.49
TP53-227ENST00000622645 PRDM2Q13029 1718 aa18.08■□□□□ 0.49
TP53-227ENST00000622645 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
TP53-227ENST00000622645 CUX2O14529 1486 aa18.07■□□□□ 0.48
TP53-227ENST00000622645 IGF1RP08069 1367 aa18.04■□□□□ 0.48
TP53-227ENST00000622645 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
TP53-227ENST00000622645 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
TP53-227ENST00000622645 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
TP53-227ENST00000622645 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
TP53-227ENST00000622645 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
TP53-227ENST00000622645 NESP48681 1621 aa17.93■□□□□ 0.46
TP53-227ENST00000622645 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
TP53-227ENST00000622645 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
TP53-227ENST00000622645 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
TP53-227ENST00000622645 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
TP53-227ENST00000622645 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
TP53-227ENST00000622645 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.44
TP53-227ENST00000622645 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
TP53-227ENST00000622645 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
TP53-227ENST00000622645 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
TP53-227ENST00000622645 P3H3Q8IVL6 736 aa17.8■□□□□ 0.44
TP53-227ENST00000622645 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
TP53-227ENST00000622645 ITGAEP38570 1179 aa17.75■□□□□ 0.43
TP53-227ENST00000622645 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
TP53-227ENST00000622645 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
TP53-227ENST00000622645 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
TP53-227ENST00000622645 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
TP53-227ENST00000622645 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
TP53-227ENST00000622645 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
TP53-227ENST00000622645 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms