RNA–Protein interactions for RNA: ENST00000621158.4

CREB3L1-206, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREB3L1, Length 2,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-206ENST00000621158 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
CREB3L1-206ENST00000621158 SHROOM4Q9ULL8 1493 aa31.47■■■□□ 2.63
CREB3L1-206ENST00000621158 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
CREB3L1-206ENST00000621158 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
CREB3L1-206ENST00000621158 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
CREB3L1-206ENST00000621158 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.5
CREB3L1-206ENST00000621158 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
CREB3L1-206ENST00000621158 ABCC9O60706 1549 aa29.6■■■□□ 2.33
CREB3L1-206ENST00000621158 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
CREB3L1-206ENST00000621158 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
CREB3L1-206ENST00000621158 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
CREB3L1-206ENST00000621158 NACADO15069 1562 aa29.11■■■□□ 2.25
CREB3L1-206ENST00000621158 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
CREB3L1-206ENST00000621158 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
CREB3L1-206ENST00000621158 LOC105371045A0A1W2PR82 267 aa28.82■■■□□ 2.2
CREB3L1-206ENST00000621158 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
CREB3L1-206ENST00000621158 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
CREB3L1-206ENST00000621158 WIZO95785 1651 aa28.55■■■□□ 2.16
CREB3L1-206ENST00000621158 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
CREB3L1-206ENST00000621158 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
CREB3L1-206ENST00000621158 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
CREB3L1-206ENST00000621158 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
CREB3L1-206ENST00000621158 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
CREB3L1-206ENST00000621158 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
CREB3L1-206ENST00000621158 BAZ1AQ9NRL2 1556 aaPredicted RBP28.29■■■□□ 2.12
CREB3L1-206ENST00000621158 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
CREB3L1-206ENST00000621158 HRCP23327 699 aa28.05■■■□□ 2.08
CREB3L1-206ENST00000621158 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
CREB3L1-206ENST00000621158 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
CREB3L1-206ENST00000621158 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
CREB3L1-206ENST00000621158 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
CREB3L1-206ENST00000621158 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
CREB3L1-206ENST00000621158 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
CREB3L1-206ENST00000621158 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
CREB3L1-206ENST00000621158 PPARGC1BQ86YN6 1023 aaKnown RBP27.74■■■□□ 2.03
CREB3L1-206ENST00000621158 SOGA1O94964 1423 aa27.53■■■□□ 2
CREB3L1-206ENST00000621158 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
CREB3L1-206ENST00000621158 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
CREB3L1-206ENST00000621158 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
CREB3L1-206ENST00000621158 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
CREB3L1-206ENST00000621158 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
CREB3L1-206ENST00000621158 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
CREB3L1-206ENST00000621158 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
CREB3L1-206ENST00000621158 UBTFP17480 764 aaKnown RBP27.25■■□□□ 1.95
CREB3L1-206ENST00000621158 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
CREB3L1-206ENST00000621158 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
CREB3L1-206ENST00000621158 EEA1Q15075 1411 aa27.11■■□□□ 1.93
CREB3L1-206ENST00000621158 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
CREB3L1-206ENST00000621158 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
CREB3L1-206ENST00000621158 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
CREB3L1-206ENST00000621158 RANGAP1P46060 587 aaPredicted RBP26.97■■□□□ 1.91
CREB3L1-206ENST00000621158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
CREB3L1-206ENST00000621158 ZEB1P37275 1124 aaPredicted RBP26.93■■□□□ 1.9
CREB3L1-206ENST00000621158 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
CREB3L1-206ENST00000621158 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
CREB3L1-206ENST00000621158 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
CREB3L1-206ENST00000621158 RAPGEF2Q9Y4G8 1499 aa26.84■■□□□ 1.89
CREB3L1-206ENST00000621158 KIF21BO75037 1637 aa26.79■■□□□ 1.88
CREB3L1-206ENST00000621158 CCER1Q8TC90 406 aaPredicted RBP26.76■■□□□ 1.87
CREB3L1-206ENST00000621158 CLIP1P30622 1438 aa26.75■■□□□ 1.87
CREB3L1-206ENST00000621158 CUX1P39880 1505 aa26.73■■□□□ 1.87
CREB3L1-206ENST00000621158 BIVM-ERCC5R4GMW8 1640 aa26.71■■□□□ 1.87
CREB3L1-206ENST00000621158 CFTRP13569 1480 aa26.71■■□□□ 1.87
CREB3L1-206ENST00000621158 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
CREB3L1-206ENST00000621158 VPS8Q8N3P4 1428 aa26.54■■□□□ 1.84
CREB3L1-206ENST00000621158 PRXQ9BXM0 1461 aa26.52■■□□□ 1.84
CREB3L1-206ENST00000621158 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
CREB3L1-206ENST00000621158 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
CREB3L1-206ENST00000621158 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
CREB3L1-206ENST00000621158 APLP2Q06481 763 aa26.49■■□□□ 1.83
CREB3L1-206ENST00000621158 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
CREB3L1-206ENST00000621158 CUX2O14529 1486 aa26.38■■□□□ 1.81
CREB3L1-206ENST00000621158 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
CREB3L1-206ENST00000621158 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
CREB3L1-206ENST00000621158 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
CREB3L1-206ENST00000621158 NESP48681 1621 aa26.29■■□□□ 1.8
CREB3L1-206ENST00000621158 IGF1RP08069 1367 aa26.29■■□□□ 1.8
CREB3L1-206ENST00000621158 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
CREB3L1-206ENST00000621158 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
CREB3L1-206ENST00000621158 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
CREB3L1-206ENST00000621158 ARHGAP35Q9NRY4 1499 aa26.18■■□□□ 1.78
CREB3L1-206ENST00000621158 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
CREB3L1-206ENST00000621158 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
CREB3L1-206ENST00000621158 P3H3Q8IVL6 736 aa26.09■■□□□ 1.77
CREB3L1-206ENST00000621158 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
CREB3L1-206ENST00000621158 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
CREB3L1-206ENST00000621158 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
CREB3L1-206ENST00000621158 DIEXFQ68CQ4 756 aaKnown RBP26.01■■□□□ 1.75
CREB3L1-206ENST00000621158 ITGAEP38570 1179 aa25.99■■□□□ 1.75
CREB3L1-206ENST00000621158 ATP1B4Q9UN42 357 aaPredicted RBP25.96■■□□□ 1.75
CREB3L1-206ENST00000621158 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
CREB3L1-206ENST00000621158 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
CREB3L1-206ENST00000621158 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
CREB3L1-206ENST00000621158 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
CREB3L1-206ENST00000621158 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
CREB3L1-206ENST00000621158 RRBP1Q9P2E9 1410 aaKnown RBP25.84■■□□□ 1.73
CREB3L1-206ENST00000621158 FHOD3Q2V2M9 1422 aa25.83■■□□□ 1.73
CREB3L1-206ENST00000621158 CCNB3Q8WWL7 1395 aa25.83■■□□□ 1.73
CREB3L1-206ENST00000621158 DHX57Q6P158 1386 aaKnown RBP25.79■■□□□ 1.72
CREB3L1-206ENST00000621158 TIAM1Q13009 1591 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms