RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
AGRN-210ENST00000620552 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
AGRN-210ENST00000620552 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
AGRN-210ENST00000620552 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
AGRN-210ENST00000620552 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
AGRN-210ENST00000620552 APLP2Q06481 763 aa22.33■■□□□ 1.16
AGRN-210ENST00000620552 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
AGRN-210ENST00000620552 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
AGRN-210ENST00000620552 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
AGRN-210ENST00000620552 RANGAP1P46060 587 aaPredicted RBP21.96■■□□□ 1.11
AGRN-210ENST00000620552 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
AGRN-210ENST00000620552 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
AGRN-210ENST00000620552 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
AGRN-210ENST00000620552 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
AGRN-210ENST00000620552 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
AGRN-210ENST00000620552 ERICH6Q7L0X2 663 aa21.29■■□□□ 1
AGRN-210ENST00000620552 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
AGRN-210ENST00000620552 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
AGRN-210ENST00000620552 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
AGRN-210ENST00000620552 PPARGC1BQ86YN6 1023 aaKnown RBP21.07■□□□□ 0.96
AGRN-210ENST00000620552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.95
AGRN-210ENST00000620552 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.95
AGRN-210ENST00000620552 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
AGRN-210ENST00000620552 NEFLP07196 543 aa20.92■□□□□ 0.94
AGRN-210ENST00000620552 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.94
AGRN-210ENST00000620552 ITGAEP38570 1179 aa20.87■□□□□ 0.93
AGRN-210ENST00000620552 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
AGRN-210ENST00000620552 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
AGRN-210ENST00000620552 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
AGRN-210ENST00000620552 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
AGRN-210ENST00000620552 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
AGRN-210ENST00000620552 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
AGRN-210ENST00000620552 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
AGRN-210ENST00000620552 ABCC9O60706 1549 aa20.38■□□□□ 0.85
AGRN-210ENST00000620552 FAM50AQ14320 339 aaKnown RBP20.31■□□□□ 0.84
AGRN-210ENST00000620552 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
AGRN-210ENST00000620552 FBLN2P98095 1184 aa20.21■□□□□ 0.83
AGRN-210ENST00000620552 MYT1Q01538 1121 aa20.19■□□□□ 0.82
AGRN-210ENST00000620552 HRCP23327 699 aa20.16■□□□□ 0.82
AGRN-210ENST00000620552 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
AGRN-210ENST00000620552 NEUROD1Q13562 356 aa20.08■□□□□ 0.81
AGRN-210ENST00000620552 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
AGRN-210ENST00000620552 BCANQ96GW7 911 aa20.01■□□□□ 0.79
AGRN-210ENST00000620552 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
AGRN-210ENST00000620552 SLC24A1O60721 1099 aa20■□□□□ 0.79
AGRN-210ENST00000620552 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
AGRN-210ENST00000620552 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
AGRN-210ENST00000620552 BCL11AQ9H165 835 aa19.86■□□□□ 0.77
AGRN-210ENST00000620552 P3H3Q8IVL6 736 aa19.83■□□□□ 0.77
AGRN-210ENST00000620552 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.76
AGRN-210ENST00000620552 ZBTB47Q9UFB7 747 aaPredicted RBP19.81■□□□□ 0.76
AGRN-210ENST00000620552 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
AGRN-210ENST00000620552 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
AGRN-210ENST00000620552 ANP32CO43423 234 aa19.71■□□□□ 0.75
AGRN-210ENST00000620552 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
AGRN-210ENST00000620552 NEFMP07197 916 aa19.67■□□□□ 0.74
AGRN-210ENST00000620552 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
AGRN-210ENST00000620552 SCRIBQ14160 1630 aa19.64■□□□□ 0.74
AGRN-210ENST00000620552 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
AGRN-210ENST00000620552 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
AGRN-210ENST00000620552 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
AGRN-210ENST00000620552 NPM1P06748 294 aaKnown RBP eCLIP19.47■□□□□ 0.71
AGRN-210ENST00000620552 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
AGRN-210ENST00000620552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■□□□□ 11.1
AGRN-210ENST00000620552 GTF3C3Q9Y5Q9 886 aa19.31■□□□□ 0.68
AGRN-210ENST00000620552 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
AGRN-210ENST00000620552 A0A0G2JS52 829 aa19.26■□□□□ 0.67
AGRN-210ENST00000620552 TONSLQ96HA7 1378 aa19.23■□□□□ 0.67
AGRN-210ENST00000620552 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
AGRN-210ENST00000620552 NPM2Q86SE8 214 aaKnown RBP19.23■□□□□ 0.67
AGRN-210ENST00000620552 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
AGRN-210ENST00000620552 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
AGRN-210ENST00000620552 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
AGRN-210ENST00000620552 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
AGRN-210ENST00000620552 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
AGRN-210ENST00000620552 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
AGRN-210ENST00000620552 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
AGRN-210ENST00000620552 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
AGRN-210ENST00000620552 FAM9BQ8IZU0 186 aa19.12■□□□□ 0.65
AGRN-210ENST00000620552 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
AGRN-210ENST00000620552 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
AGRN-210ENST00000620552 C14orf37Q86TY3 774 aa19.05■□□□□ 0.64
AGRN-210ENST00000620552 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
AGRN-210ENST00000620552 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
AGRN-210ENST00000620552 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
AGRN-210ENST00000620552 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
AGRN-210ENST00000620552 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
AGRN-210ENST00000620552 TMC1Q8TDI8 760 aa19■□□□□ 0.63
AGRN-210ENST00000620552 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
AGRN-210ENST00000620552 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
AGRN-210ENST00000620552 FKBP8Q14318 412 aa18.98■□□□□ 0.63
AGRN-210ENST00000620552 PPP1R15AO75807 674 aaPredicted RBP18.97■□□□□ 0.63
AGRN-210ENST00000620552 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
AGRN-210ENST00000620552 ANP32BQ92688 251 aaKnown RBP18.96■□□□□ 0.63
AGRN-210ENST00000620552 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
AGRN-210ENST00000620552 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
AGRN-210ENST00000620552 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
AGRN-210ENST00000620552 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.88■□□□□ 0.61
AGRN-210ENST00000620552 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
AGRN-210ENST00000620552 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms