RNA–Protein interactions for RNA: ENST00000618664.1

RNU2-1-201, Transcript of RNA, U2 small nuclear 1, humanhuman

BASIC

Gene RNU2-1, Length 191 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-1-201ENST00000618664 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
RNU2-1-201ENST00000618664 CHIC1Q5VXU3 224 aa14.47□□□□□ -0.09
RNU2-1-201ENST00000618664 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
RNU2-1-201ENST00000618664 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
RNU2-1-201ENST00000618664 FOXD1Q16676 465 aa12.25□□□□□ -0.45
RNU2-1-201ENST00000618664 MSH5O43196 834 aa11.61□□□□□ -0.55
RNU2-1-201ENST00000618664 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.57
RNU2-1-201ENST00000618664 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
RNU2-1-201ENST00000618664 PIAS4Q8N2W9 510 aaPredicted RBP11.43□□□□□ -0.58
RNU2-1-201ENST00000618664 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
RNU2-1-201ENST00000618664 ADRA2BP18089 450 aa11.25□□□□□ -0.61
RNU2-1-201ENST00000618664 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
RNU2-1-201ENST00000618664 DMRT2Q9Y5R5 561 aa10.42□□□□□ -0.74
RNU2-1-201ENST00000618664 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
RNU2-1-201ENST00000618664 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
RNU2-1-201ENST00000618664 CACNB1Q02641 598 aaPredicted RBP10.01□□□□□ -0.81
RNU2-1-201ENST00000618664 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
RNU2-1-201ENST00000618664 DCAF8L1A6NGE4 600 aa9.96□□□□□ -0.82
RNU2-1-201ENST00000618664 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
RNU2-1-201ENST00000618664 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
RNU2-1-201ENST00000618664 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
RNU2-1-201ENST00000618664 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
RNU2-1-201ENST00000618664 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
RNU2-1-201ENST00000618664 NCBP3Q53F19 620 aaKnown RBP9.67□□□□□ -0.86
RNU2-1-201ENST00000618664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNU2-1-201ENST00000618664 NPM3O75607 178 aaKnown RBP9.45□□□□□ -0.9
RNU2-1-201ENST00000618664 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
RNU2-1-201ENST00000618664 CAPN15O75808 1086 aa9.16□□□□□ -0.94
RNU2-1-201ENST00000618664 DSG3P32926 999 aa9.16□□□□□ -0.94
RNU2-1-201ENST00000618664 SPINK5Q9NQ38 1064 aaPredicted RBP9.13□□□□□ -0.95
RNU2-1-201ENST00000618664 KCNA4P22459 653 aa9.11□□□□□ -0.95
RNU2-1-201ENST00000618664 APLP2Q06481 763 aa9.1□□□□□ -0.95
RNU2-1-201ENST00000618664 SLC4A2P04920 1241 aa9.05□□□□□ -0.96
RNU2-1-201ENST00000618664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
RNU2-1-201ENST00000618664 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
RNU2-1-201ENST00000618664 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
RNU2-1-201ENST00000618664 POTEHQ6S545 545 aa9.01□□□□□ -0.97
RNU2-1-201ENST00000618664 TRHP20396 242 aaPredicted RBP8.98□□□□□ -0.97
RNU2-1-201ENST00000618664 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
RNU2-1-201ENST00000618664 ABCB7O75027 752 aa8.91□□□□□ -0.98
RNU2-1-201ENST00000618664 RBM42Q9BTD8 480 aaKnown RBP8.82□□□□□ -1
RNU2-1-201ENST00000618664 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
RNU2-1-201ENST00000618664 POLA2Q14181 598 aa8.7□□□□□ -1.02
RNU2-1-201ENST00000618664 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
RNU2-1-201ENST00000618664 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
RNU2-1-201ENST00000618664 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
RNU2-1-201ENST00000618664 ZBTB12Q9Y330 459 aaPredicted RBP8.61□□□□□ -1.03
RNU2-1-201ENST00000618664 AKT1S1Q96B36 256 aa8.56□□□□□ -1.04
RNU2-1-201ENST00000618664 ATF5Q9Y2D1 282 aaPredicted RBP8.51□□□□□ -1.05
RNU2-1-201ENST00000618664 REM2Q8IYK8 340 aaPredicted RBP8.43□□□□□ -1.06
RNU2-1-201ENST00000618664 OSCARQ8IYS5 282 aa8.42□□□□□ -1.06
RNU2-1-201ENST00000618664 ATXN8OSP0DMR3 200 aa8.41□□□□□ -1.06
RNU2-1-201ENST00000618664 SP7Q8TDD2 431 aaPredicted RBP8.39□□□□□ -1.07
RNU2-1-201ENST00000618664 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
RNU2-1-201ENST00000618664 ZBTB22O15209 634 aa8.34□□□□□ -1.07
RNU2-1-201ENST00000618664 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
RNU2-1-201ENST00000618664 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
RNU2-1-201ENST00000618664 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
RNU2-1-201ENST00000618664 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
RNU2-1-201ENST00000618664 FBLN2P98095 1184 aa8.3□□□□□ -1.08
RNU2-1-201ENST00000618664 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
RNU2-1-201ENST00000618664 HAX1O00165 279 aa8.27□□□□□ -1.09
RNU2-1-201ENST00000618664 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
RNU2-1-201ENST00000618664 SSUH2Q9Y2M2 353 aa8.15□□□□□ -1.1
RNU2-1-201ENST00000618664 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
RNU2-1-201ENST00000618664 ZNF692Q9BU19 519 aaPredicted RBP8.13□□□□□ -1.11
RNU2-1-201ENST00000618664 CLEC11AQ9Y240 323 aa8.13□□□□□ -1.11
RNU2-1-201ENST00000618664 PRKAR2AP13861 404 aaKnown RBP8.12□□□□□ -1.11
RNU2-1-201ENST00000618664 EVX2Q03828 476 aa8.09□□□□□ -1.11
RNU2-1-201ENST00000618664 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
RNU2-1-201ENST00000618664 PRR29P0C7W0 189 aa8□□□□□ -1.13
RNU2-1-201ENST00000618664 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
RNU2-1-201ENST00000618664 GABBR2O75899 941 aa7.95□□□□□ -1.14
RNU2-1-201ENST00000618664 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
RNU2-1-201ENST00000618664 CLCN6P51797 869 aa7.9□□□□□ -1.14
RNU2-1-201ENST00000618664 FARP1Q9Y4F1 1045 aaPredicted RBP7.87□□□□□ -1.15
RNU2-1-201ENST00000618664 CD44P16070 742 aaKnown RBP7.86□□□□□ -1.15
RNU2-1-201ENST00000618664 LHX8Q68G74 356 aa7.86□□□□□ -1.15
RNU2-1-201ENST00000618664 CSRNP3Q8WYN3 585 aa7.84□□□□□ -1.15
RNU2-1-201ENST00000618664 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
RNU2-1-201ENST00000618664 ZNF579Q8NAF0 562 aaKnown RBP7.77□□□□□ -1.17
RNU2-1-201ENST00000618664 POTEIP0CG38 1075 aa7.75□□□□□ -1.17
RNU2-1-201ENST00000618664 DCBLD2Q96PD2 775 aa7.74□□□□□ -1.17
RNU2-1-201ENST00000618664 CREBZFQ9NS37 354 aa7.74□□□□□ -1.17
RNU2-1-201ENST00000618664 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
RNU2-1-201ENST00000618664 SPDYE4A6NLX3 237 aa7.71□□□□□ -1.18
RNU2-1-201ENST00000618664 PAK3O75914 559 aaPredicted RBP7.69□□□□□ -1.18
RNU2-1-201ENST00000618664 NPM1P06748 294 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNU2-1-201ENST00000618664 EHMT2Q96KQ7 1210 aa7.64□□□□□ -1.19
RNU2-1-201ENST00000618664 GALR2O43603 387 aaPredicted RBP7.62□□□□□ -1.19
RNU2-1-201ENST00000618664 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
RNU2-1-201ENST00000618664 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
RNU2-1-201ENST00000618664 PROM2Q8N271 834 aa7.52□□□□□ -1.21
RNU2-1-201ENST00000618664 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
RNU2-1-201ENST00000618664 ASTLQ6HA08 431 aaPredicted RBP7.5□□□□□ -1.21
RNU2-1-201ENST00000618664 SLC39A7Q92504 469 aa7.49□□□□□ -1.21
RNU2-1-201ENST00000618664 MS4A3Q96HJ5 214 aa7.49□□□□□ -1.21
RNU2-1-201ENST00000618664 POTEB2H3BUK9 544 aa7.48□□□□□ -1.21
RNU2-1-201ENST00000618664 C7P10643 843 aa7.47□□□□□ -1.21
RNU2-1-201ENST00000618664 PELP1Q8IZL8 1130 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms