RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
U6.42-201ENST00000618440 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
U6.42-201ENST00000618440 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
U6.42-201ENST00000618440 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
U6.42-201ENST00000618440 FOXD1Q16676 465 aa23.39■■□□□ 1.33
U6.42-201ENST00000618440 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
U6.42-201ENST00000618440 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
U6.42-201ENST00000618440 MSH5O43196 834 aa21.78■■□□□ 1.08
U6.42-201ENST00000618440 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
U6.42-201ENST00000618440 ADRA2BP18089 450 aa21.69■■□□□ 1.06
U6.42-201ENST00000618440 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
U6.42-201ENST00000618440 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
U6.42-201ENST00000618440 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
U6.42-201ENST00000618440 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
U6.42-201ENST00000618440 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
U6.42-201ENST00000618440 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
U6.42-201ENST00000618440 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
U6.42-201ENST00000618440 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
U6.42-201ENST00000618440 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
U6.42-201ENST00000618440 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
U6.42-201ENST00000618440 RNF39Q9H2S5 420 aa18.69■□□□□ 0.58
U6.42-201ENST00000618440 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
U6.42-201ENST00000618440 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
U6.42-201ENST00000618440 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
U6.42-201ENST00000618440 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
U6.42-201ENST00000618440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
U6.42-201ENST00000618440 KCNA4P22459 653 aa17.86■□□□□ 0.45
U6.42-201ENST00000618440 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
U6.42-201ENST00000618440 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
U6.42-201ENST00000618440 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
U6.42-201ENST00000618440 DSG3P32926 999 aa17.46■□□□□ 0.39
U6.42-201ENST00000618440 CAPN15O75808 1086 aa17.4■□□□□ 0.38
U6.42-201ENST00000618440 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
U6.42-201ENST00000618440 ABCB7O75027 752 aa17.06■□□□□ 0.32
U6.42-201ENST00000618440 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
U6.42-201ENST00000618440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
U6.42-201ENST00000618440 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
U6.42-201ENST00000618440 APLP2Q06481 763 aa16.98■□□□□ 0.31
U6.42-201ENST00000618440 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
U6.42-201ENST00000618440 POTEHQ6S545 545 aa16.87■□□□□ 0.29
U6.42-201ENST00000618440 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
U6.42-201ENST00000618440 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
U6.42-201ENST00000618440 POLA2Q14181 598 aa16.66■□□□□ 0.26
U6.42-201ENST00000618440 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
U6.42-201ENST00000618440 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
U6.42-201ENST00000618440 ZBTB22O15209 634 aa16.51■□□□□ 0.23
U6.42-201ENST00000618440 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
U6.42-201ENST00000618440 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
U6.42-201ENST00000618440 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
U6.42-201ENST00000618440 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
U6.42-201ENST00000618440 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
U6.42-201ENST00000618440 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
U6.42-201ENST00000618440 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
U6.42-201ENST00000618440 PIP4P2Q8N4L2 257 aa15.93■□□□□ 0.14
U6.42-201ENST00000618440 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
U6.42-201ENST00000618440 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
U6.42-201ENST00000618440 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
U6.42-201ENST00000618440 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
U6.42-201ENST00000618440 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
U6.42-201ENST00000618440 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
U6.42-201ENST00000618440 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
U6.42-201ENST00000618440 FBLN2P98095 1184 aa15.73■□□□□ 0.11
U6.42-201ENST00000618440 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
U6.42-201ENST00000618440 EVX2Q03828 476 aa15.58■□□□□ 0.08
U6.42-201ENST00000618440 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
U6.42-201ENST00000618440 HAX1O00165 279 aa15.55■□□□□ 0.08
U6.42-201ENST00000618440 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
U6.42-201ENST00000618440 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
U6.42-201ENST00000618440 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
U6.42-201ENST00000618440 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
U6.42-201ENST00000618440 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
U6.42-201ENST00000618440 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
U6.42-201ENST00000618440 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
U6.42-201ENST00000618440 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
U6.42-201ENST00000618440 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
U6.42-201ENST00000618440 GABBR2O75899 941 aa15.1■□□□□ 0.01
U6.42-201ENST00000618440 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
U6.42-201ENST00000618440 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
U6.42-201ENST00000618440 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
U6.42-201ENST00000618440 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
U6.42-201ENST00000618440 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
U6.42-201ENST00000618440 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
U6.42-201ENST00000618440 LHX8Q68G74 356 aa14.74□□□□□ -0.05
U6.42-201ENST00000618440 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
U6.42-201ENST00000618440 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
U6.42-201ENST00000618440 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
U6.42-201ENST00000618440 CLCN6P51797 869 aa14.65□□□□□ -0.06
U6.42-201ENST00000618440 PROM2Q8N271 834 aa14.65□□□□□ -0.06
U6.42-201ENST00000618440 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
U6.42-201ENST00000618440 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
U6.42-201ENST00000618440 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
U6.42-201ENST00000618440 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
U6.42-201ENST00000618440 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
U6.42-201ENST00000618440 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
U6.42-201ENST00000618440 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
U6.42-201ENST00000618440 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
U6.42-201ENST00000618440 OTUD5Q96G74 571 aa14.31□□□□□ -0.12
U6.42-201ENST00000618440 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
U6.42-201ENST00000618440 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
U6.42-201ENST00000618440 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms