RNA–Protein interactions for RNA: ENST00000618289.1

RNU6-489P-201, Transcript of RNA, U6 small nuclear 489, pseudogene, humanhuman

BASIC

Gene RNU6-489P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-489P-201ENST00000618289 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
RNU6-489P-201ENST00000618289 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
RNU6-489P-201ENST00000618289 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
RNU6-489P-201ENST00000618289 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
RNU6-489P-201ENST00000618289 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
RNU6-489P-201ENST00000618289 FOXD1Q16676 465 aa19.98■□□□□ 0.79
RNU6-489P-201ENST00000618289 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
RNU6-489P-201ENST00000618289 ADRA2BP18089 450 aa19.36■□□□□ 0.69
RNU6-489P-201ENST00000618289 PIAS4Q8N2W9 510 aaPredicted RBP18.81■□□□□ 0.6
RNU6-489P-201ENST00000618289 MSH5O43196 834 aa18.26■□□□□ 0.51
RNU6-489P-201ENST00000618289 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
RNU6-489P-201ENST00000618289 KCNA4P22459 653 aa17.84■□□□□ 0.45
RNU6-489P-201ENST00000618289 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
RNU6-489P-201ENST00000618289 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
RNU6-489P-201ENST00000618289 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
RNU6-489P-201ENST00000618289 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
RNU6-489P-201ENST00000618289 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
RNU6-489P-201ENST00000618289 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
RNU6-489P-201ENST00000618289 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
RNU6-489P-201ENST00000618289 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
RNU6-489P-201ENST00000618289 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
RNU6-489P-201ENST00000618289 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
RNU6-489P-201ENST00000618289 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
RNU6-489P-201ENST00000618289 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
RNU6-489P-201ENST00000618289 ZBTB22O15209 634 aa16.48■□□□□ 0.23
RNU6-489P-201ENST00000618289 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
RNU6-489P-201ENST00000618289 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
RNU6-489P-201ENST00000618289 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
RNU6-489P-201ENST00000618289 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
RNU6-489P-201ENST00000618289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
RNU6-489P-201ENST00000618289 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
RNU6-489P-201ENST00000618289 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
RNU6-489P-201ENST00000618289 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
RNU6-489P-201ENST00000618289 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
RNU6-489P-201ENST00000618289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
RNU6-489P-201ENST00000618289 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
RNU6-489P-201ENST00000618289 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
RNU6-489P-201ENST00000618289 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
RNU6-489P-201ENST00000618289 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
RNU6-489P-201ENST00000618289 APLP2Q06481 763 aa15.42■□□□□ 0.06
RNU6-489P-201ENST00000618289 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
RNU6-489P-201ENST00000618289 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
RNU6-489P-201ENST00000618289 CAPN15O75808 1086 aa15.23■□□□□ 0.03
RNU6-489P-201ENST00000618289 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
RNU6-489P-201ENST00000618289 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
RNU6-489P-201ENST00000618289 POLA2Q14181 598 aa15.05■□□□□ -0
RNU6-489P-201ENST00000618289 DSG3P32926 999 aa15.04■□□□□ -0
RNU6-489P-201ENST00000618289 ABCB7O75027 752 aa15□□□□□ -0.01
RNU6-489P-201ENST00000618289 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.01
RNU6-489P-201ENST00000618289 FKBP8Q14318 412 aa14.82□□□□□ -0.04
RNU6-489P-201ENST00000618289 FBLN2P98095 1184 aa14.8□□□□□ -0.04
RNU6-489P-201ENST00000618289 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
RNU6-489P-201ENST00000618289 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
RNU6-489P-201ENST00000618289 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
RNU6-489P-201ENST00000618289 PROM2Q8N271 834 aa14.54□□□□□ -0.08
RNU6-489P-201ENST00000618289 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
RNU6-489P-201ENST00000618289 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
RNU6-489P-201ENST00000618289 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
RNU6-489P-201ENST00000618289 SSUH2Q9Y2M2 353 aa14.43□□□□□ -0.1
RNU6-489P-201ENST00000618289 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
RNU6-489P-201ENST00000618289 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
RNU6-489P-201ENST00000618289 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNU6-489P-201ENST00000618289 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
RNU6-489P-201ENST00000618289 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
RNU6-489P-201ENST00000618289 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
RNU6-489P-201ENST00000618289 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
RNU6-489P-201ENST00000618289 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
RNU6-489P-201ENST00000618289 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
RNU6-489P-201ENST00000618289 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
RNU6-489P-201ENST00000618289 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
RNU6-489P-201ENST00000618289 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
RNU6-489P-201ENST00000618289 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
RNU6-489P-201ENST00000618289 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
RNU6-489P-201ENST00000618289 MIER1Q8N108 512 aa13.78□□□□□ -0.2
RNU6-489P-201ENST00000618289 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
RNU6-489P-201ENST00000618289 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
RNU6-489P-201ENST00000618289 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
RNU6-489P-201ENST00000618289 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
RNU6-489P-201ENST00000618289 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
RNU6-489P-201ENST00000618289 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
RNU6-489P-201ENST00000618289 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
RNU6-489P-201ENST00000618289 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNU6-489P-201ENST00000618289 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
RNU6-489P-201ENST00000618289 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
RNU6-489P-201ENST00000618289 PKD2Q13563 968 aa13.56□□□□□ -0.24
RNU6-489P-201ENST00000618289 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
RNU6-489P-201ENST00000618289 NUBP1P53384 320 aa13.53□□□□□ -0.24
RNU6-489P-201ENST00000618289 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
RNU6-489P-201ENST00000618289 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
RNU6-489P-201ENST00000618289 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
RNU6-489P-201ENST00000618289 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
RNU6-489P-201ENST00000618289 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
RNU6-489P-201ENST00000618289 CIZ1Q9ULV3 898 aaPredicted RBP13.36□□□□□ -0.27
RNU6-489P-201ENST00000618289 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
RNU6-489P-201ENST00000618289 GSE1Q14687 1217 aa13.33□□□□□ -0.28
RNU6-489P-201ENST00000618289 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
RNU6-489P-201ENST00000618289 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
RNU6-489P-201ENST00000618289 TRIM41Q8WV44 630 aa13.28□□□□□ -0.28
RNU6-489P-201ENST00000618289 RGL2O15211 777 aa13.27□□□□□ -0.29
RNU6-489P-201ENST00000618289 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms