RNA–Protein interactions for RNA: ENST00000617380.1

PCDHGB5-201, Transcript of protocadherin gamma subfamily B, 5, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDHGB5, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB5-201ENST00000617380 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
PCDHGB5-201ENST00000617380 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
PCDHGB5-201ENST00000617380 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
PCDHGB5-201ENST00000617380 SHROOM4Q9ULL8 1493 aa20.47■□□□□ 0.87
PCDHGB5-201ENST00000617380 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
PCDHGB5-201ENST00000617380 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
PCDHGB5-201ENST00000617380 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
PCDHGB5-201ENST00000617380 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
PCDHGB5-201ENST00000617380 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
PCDHGB5-201ENST00000617380 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
PCDHGB5-201ENST00000617380 HRCP23327 699 aa18.92■□□□□ 0.62
PCDHGB5-201ENST00000617380 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.61
PCDHGB5-201ENST00000617380 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
PCDHGB5-201ENST00000617380 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
PCDHGB5-201ENST00000617380 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
PCDHGB5-201ENST00000617380 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
PCDHGB5-201ENST00000617380 APLP2Q06481 763 aa18.53■□□□□ 0.56
PCDHGB5-201ENST00000617380 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
PCDHGB5-201ENST00000617380 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
PCDHGB5-201ENST00000617380 ABCC9O60706 1549 aa18.45■□□□□ 0.54
PCDHGB5-201ENST00000617380 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
PCDHGB5-201ENST00000617380 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
PCDHGB5-201ENST00000617380 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.52
PCDHGB5-201ENST00000617380 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
PCDHGB5-201ENST00000617380 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
PCDHGB5-201ENST00000617380 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
PCDHGB5-201ENST00000617380 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
PCDHGB5-201ENST00000617380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
PCDHGB5-201ENST00000617380 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
PCDHGB5-201ENST00000617380 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDHGB5-201ENST00000617380 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
PCDHGB5-201ENST00000617380 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
PCDHGB5-201ENST00000617380 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
PCDHGB5-201ENST00000617380 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
PCDHGB5-201ENST00000617380 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
PCDHGB5-201ENST00000617380 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
PCDHGB5-201ENST00000617380 NACADO15069 1562 aa17.8■□□□□ 0.44
PCDHGB5-201ENST00000617380 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
PCDHGB5-201ENST00000617380 ITGAEP38570 1179 aa17.67■□□□□ 0.42
PCDHGB5-201ENST00000617380 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
PCDHGB5-201ENST00000617380 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
PCDHGB5-201ENST00000617380 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB5-201ENST00000617380 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
PCDHGB5-201ENST00000617380 EEA1Q15075 1411 aa17.5■□□□□ 0.39
PCDHGB5-201ENST00000617380 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
PCDHGB5-201ENST00000617380 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
PCDHGB5-201ENST00000617380 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
PCDHGB5-201ENST00000617380 NEFLP07196 543 aa17.42■□□□□ 0.38
PCDHGB5-201ENST00000617380 GOLGA3Q08378 1498 aa17.4■□□□□ 0.38
PCDHGB5-201ENST00000617380 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PCDHGB5-201ENST00000617380 MYT1Q01538 1121 aa17.37■□□□□ 0.37
PCDHGB5-201ENST00000617380 CLIP1P30622 1438 aa17.37■□□□□ 0.37
PCDHGB5-201ENST00000617380 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
PCDHGB5-201ENST00000617380 WIZO95785 1651 aa17.34■□□□□ 0.37
PCDHGB5-201ENST00000617380 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
PCDHGB5-201ENST00000617380 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
PCDHGB5-201ENST00000617380 SOGA1O94964 1423 aa17.31■□□□□ 0.36
PCDHGB5-201ENST00000617380 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
PCDHGB5-201ENST00000617380 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
PCDHGB5-201ENST00000617380 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
PCDHGB5-201ENST00000617380 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
PCDHGB5-201ENST00000617380 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
PCDHGB5-201ENST00000617380 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
PCDHGB5-201ENST00000617380 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
PCDHGB5-201ENST00000617380 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
PCDHGB5-201ENST00000617380 MIER1Q8N108 512 aa17.12■□□□□ 0.33
PCDHGB5-201ENST00000617380 FBLN2P98095 1184 aa17.08■□□□□ 0.33
PCDHGB5-201ENST00000617380 SMARCA4P51532 1647 aa17.08■□□□□ 0.33
PCDHGB5-201ENST00000617380 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
PCDHGB5-201ENST00000617380 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
PCDHGB5-201ENST00000617380 ANP32CO43423 234 aa17.04■□□□□ 0.32
PCDHGB5-201ENST00000617380 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
PCDHGB5-201ENST00000617380 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
PCDHGB5-201ENST00000617380 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
PCDHGB5-201ENST00000617380 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
PCDHGB5-201ENST00000617380 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
PCDHGB5-201ENST00000617380 BCANQ96GW7 911 aa16.95■□□□□ 0.3
PCDHGB5-201ENST00000617380 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
PCDHGB5-201ENST00000617380 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
PCDHGB5-201ENST00000617380 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
PCDHGB5-201ENST00000617380 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
PCDHGB5-201ENST00000617380 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
PCDHGB5-201ENST00000617380 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
PCDHGB5-201ENST00000617380 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
PCDHGB5-201ENST00000617380 MTUS2Q5JR59 1369 aa16.83■□□□□ 0.28
PCDHGB5-201ENST00000617380 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
PCDHGB5-201ENST00000617380 CUX2O14529 1486 aa16.79■□□□□ 0.28
PCDHGB5-201ENST00000617380 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.28
PCDHGB5-201ENST00000617380 FKBP8Q14318 412 aa16.76■□□□□ 0.27
PCDHGB5-201ENST00000617380 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
PCDHGB5-201ENST00000617380 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
PCDHGB5-201ENST00000617380 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB5-201ENST00000617380 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
PCDHGB5-201ENST00000617380 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB5-201ENST00000617380 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
PCDHGB5-201ENST00000617380 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCDHGB5-201ENST00000617380 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PCDHGB5-201ENST00000617380 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
PCDHGB5-201ENST00000617380 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
PCDHGB5-201ENST00000617380 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms