RNA–Protein interactions for RNA: ENST00000616578.1

LINC02335-201, Transcript of long intergenic non-protein coding RNA 2335, humanhuman

TSL 3 BASIC

Gene LINC02335, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02335-201ENST00000616578 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
LINC02335-201ENST00000616578 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
LINC02335-201ENST00000616578 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
LINC02335-201ENST00000616578 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
LINC02335-201ENST00000616578 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
LINC02335-201ENST00000616578 FOXD1Q16676 465 aa22.29■■□□□ 1.16
LINC02335-201ENST00000616578 ADRA2BP18089 450 aa21.5■■□□□ 1.03
LINC02335-201ENST00000616578 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
LINC02335-201ENST00000616578 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
LINC02335-201ENST00000616578 MSH5O43196 834 aa20.66■□□□□ 0.9
LINC02335-201ENST00000616578 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
LINC02335-201ENST00000616578 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
LINC02335-201ENST00000616578 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
LINC02335-201ENST00000616578 KCNA4P22459 653 aa19.69■□□□□ 0.74
LINC02335-201ENST00000616578 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
LINC02335-201ENST00000616578 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
LINC02335-201ENST00000616578 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
LINC02335-201ENST00000616578 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
LINC02335-201ENST00000616578 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
LINC02335-201ENST00000616578 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
LINC02335-201ENST00000616578 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
LINC02335-201ENST00000616578 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
LINC02335-201ENST00000616578 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
LINC02335-201ENST00000616578 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
LINC02335-201ENST00000616578 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
LINC02335-201ENST00000616578 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
LINC02335-201ENST00000616578 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
LINC02335-201ENST00000616578 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
LINC02335-201ENST00000616578 ZBTB22O15209 634 aa18.07■□□□□ 0.48
LINC02335-201ENST00000616578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC02335-201ENST00000616578 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
LINC02335-201ENST00000616578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
LINC02335-201ENST00000616578 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
LINC02335-201ENST00000616578 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
LINC02335-201ENST00000616578 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
LINC02335-201ENST00000616578 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
LINC02335-201ENST00000616578 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
LINC02335-201ENST00000616578 APLP2Q06481 763 aa17.58■□□□□ 0.4
LINC02335-201ENST00000616578 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
LINC02335-201ENST00000616578 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
LINC02335-201ENST00000616578 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
LINC02335-201ENST00000616578 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
LINC02335-201ENST00000616578 CAPN15O75808 1086 aa17.12■□□□□ 0.33
LINC02335-201ENST00000616578 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
LINC02335-201ENST00000616578 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
LINC02335-201ENST00000616578 POLA2Q14181 598 aa16.83■□□□□ 0.28
LINC02335-201ENST00000616578 DSG3P32926 999 aa16.8■□□□□ 0.28
LINC02335-201ENST00000616578 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
LINC02335-201ENST00000616578 ABCB7O75027 752 aa16.73■□□□□ 0.27
LINC02335-201ENST00000616578 FBLN2P98095 1184 aa16.69■□□□□ 0.26
LINC02335-201ENST00000616578 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
LINC02335-201ENST00000616578 FKBP8Q14318 412 aa16.42■□□□□ 0.22
LINC02335-201ENST00000616578 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
LINC02335-201ENST00000616578 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
LINC02335-201ENST00000616578 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
LINC02335-201ENST00000616578 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
LINC02335-201ENST00000616578 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
LINC02335-201ENST00000616578 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
LINC02335-201ENST00000616578 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
LINC02335-201ENST00000616578 PROM2Q8N271 834 aa16.1■□□□□ 0.17
LINC02335-201ENST00000616578 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
LINC02335-201ENST00000616578 FBXO3Q9UK99 471 aa15.97■□□□□ 0.15
LINC02335-201ENST00000616578 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
LINC02335-201ENST00000616578 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC02335-201ENST00000616578 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
LINC02335-201ENST00000616578 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
LINC02335-201ENST00000616578 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
LINC02335-201ENST00000616578 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
LINC02335-201ENST00000616578 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
LINC02335-201ENST00000616578 PITPNM1O00562 1244 aa15.5■□□□□ 0.07
LINC02335-201ENST00000616578 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
LINC02335-201ENST00000616578 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
LINC02335-201ENST00000616578 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
LINC02335-201ENST00000616578 POTEHQ6S545 545 aa15.43■□□□□ 0.06
LINC02335-201ENST00000616578 MIER1Q8N108 512 aa15.43■□□□□ 0.06
LINC02335-201ENST00000616578 ZBTB47Q9UFB7 747 aaPredicted RBP15.42■□□□□ 0.06
LINC02335-201ENST00000616578 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
LINC02335-201ENST00000616578 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
LINC02335-201ENST00000616578 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
LINC02335-201ENST00000616578 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
LINC02335-201ENST00000616578 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
LINC02335-201ENST00000616578 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
LINC02335-201ENST00000616578 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC02335-201ENST00000616578 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC02335-201ENST00000616578 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
LINC02335-201ENST00000616578 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
LINC02335-201ENST00000616578 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
LINC02335-201ENST00000616578 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
LINC02335-201ENST00000616578 CHADLQ6NUI6 762 aa15.07■□□□□ 0
LINC02335-201ENST00000616578 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ -0
LINC02335-201ENST00000616578 NUBP1P53384 320 aa15.01□□□□□ -0.01
LINC02335-201ENST00000616578 GSE1Q14687 1217 aa15□□□□□ -0.01
LINC02335-201ENST00000616578 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
LINC02335-201ENST00000616578 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
LINC02335-201ENST00000616578 PKD2Q13563 968 aa14.91□□□□□ -0.02
LINC02335-201ENST00000616578 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
LINC02335-201ENST00000616578 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
LINC02335-201ENST00000616578 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
LINC02335-201ENST00000616578 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
LINC02335-201ENST00000616578 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms