RNA–Protein interactions for RNA: ENST00000616477.1

AC009233.1-201, humanhuman

BASIC

Gene AC009233.1, Length 371 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009233.1-201ENST00000616477 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
AC009233.1-201ENST00000616477 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
AC009233.1-201ENST00000616477 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
AC009233.1-201ENST00000616477 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
AC009233.1-201ENST00000616477 FOXD1Q16676 465 aa18.72■□□□□ 0.59
AC009233.1-201ENST00000616477 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
AC009233.1-201ENST00000616477 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
AC009233.1-201ENST00000616477 ADRA2BP18089 450 aa17.49■□□□□ 0.39
AC009233.1-201ENST00000616477 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
AC009233.1-201ENST00000616477 MSH5O43196 834 aa17.42■□□□□ 0.38
AC009233.1-201ENST00000616477 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
AC009233.1-201ENST00000616477 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
AC009233.1-201ENST00000616477 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
AC009233.1-201ENST00000616477 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
AC009233.1-201ENST00000616477 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
AC009233.1-201ENST00000616477 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
AC009233.1-201ENST00000616477 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
AC009233.1-201ENST00000616477 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
AC009233.1-201ENST00000616477 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
AC009233.1-201ENST00000616477 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
AC009233.1-201ENST00000616477 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
AC009233.1-201ENST00000616477 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
AC009233.1-201ENST00000616477 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
AC009233.1-201ENST00000616477 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
AC009233.1-201ENST00000616477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
AC009233.1-201ENST00000616477 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
AC009233.1-201ENST00000616477 KCNA4P22459 653 aa14.55□□□□□ -0.08
AC009233.1-201ENST00000616477 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
AC009233.1-201ENST00000616477 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
AC009233.1-201ENST00000616477 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
AC009233.1-201ENST00000616477 CAPN15O75808 1086 aa14.09□□□□□ -0.15
AC009233.1-201ENST00000616477 DSG3P32926 999 aa13.97□□□□□ -0.17
AC009233.1-201ENST00000616477 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
AC009233.1-201ENST00000616477 ABCB7O75027 752 aa13.81□□□□□ -0.2
AC009233.1-201ENST00000616477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
AC009233.1-201ENST00000616477 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
AC009233.1-201ENST00000616477 APLP2Q06481 763 aa13.77□□□□□ -0.21
AC009233.1-201ENST00000616477 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
AC009233.1-201ENST00000616477 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
AC009233.1-201ENST00000616477 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
AC009233.1-201ENST00000616477 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
AC009233.1-201ENST00000616477 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
AC009233.1-201ENST00000616477 POLA2Q14181 598 aa13.49□□□□□ -0.25
AC009233.1-201ENST00000616477 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
AC009233.1-201ENST00000616477 ZBTB22O15209 634 aa13.4□□□□□ -0.26
AC009233.1-201ENST00000616477 POTEHQ6S545 545 aa13.4□□□□□ -0.26
AC009233.1-201ENST00000616477 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
AC009233.1-201ENST00000616477 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
AC009233.1-201ENST00000616477 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
AC009233.1-201ENST00000616477 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
AC009233.1-201ENST00000616477 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
AC009233.1-201ENST00000616477 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
AC009233.1-201ENST00000616477 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
AC009233.1-201ENST00000616477 FBLN2P98095 1184 aa12.82□□□□□ -0.36
AC009233.1-201ENST00000616477 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
AC009233.1-201ENST00000616477 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
AC009233.1-201ENST00000616477 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
AC009233.1-201ENST00000616477 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
AC009233.1-201ENST00000616477 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
AC009233.1-201ENST00000616477 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
AC009233.1-201ENST00000616477 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
AC009233.1-201ENST00000616477 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
AC009233.1-201ENST00000616477 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
AC009233.1-201ENST00000616477 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC009233.1-201ENST00000616477 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
AC009233.1-201ENST00000616477 HAX1O00165 279 aa12.56□□□□□ -0.4
AC009233.1-201ENST00000616477 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
AC009233.1-201ENST00000616477 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
AC009233.1-201ENST00000616477 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
AC009233.1-201ENST00000616477 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
AC009233.1-201ENST00000616477 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC009233.1-201ENST00000616477 EVX2Q03828 476 aa12.44□□□□□ -0.42
AC009233.1-201ENST00000616477 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
AC009233.1-201ENST00000616477 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
AC009233.1-201ENST00000616477 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
AC009233.1-201ENST00000616477 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
AC009233.1-201ENST00000616477 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
AC009233.1-201ENST00000616477 GABBR2O75899 941 aa12.1□□□□□ -0.47
AC009233.1-201ENST00000616477 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
AC009233.1-201ENST00000616477 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
AC009233.1-201ENST00000616477 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
AC009233.1-201ENST00000616477 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
AC009233.1-201ENST00000616477 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
AC009233.1-201ENST00000616477 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
AC009233.1-201ENST00000616477 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
AC009233.1-201ENST00000616477 LHX8Q68G74 356 aa11.79□□□□□ -0.52
AC009233.1-201ENST00000616477 PROM2Q8N271 834 aa11.78□□□□□ -0.52
AC009233.1-201ENST00000616477 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
AC009233.1-201ENST00000616477 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
AC009233.1-201ENST00000616477 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
AC009233.1-201ENST00000616477 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
AC009233.1-201ENST00000616477 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
AC009233.1-201ENST00000616477 CLCN6P51797 869 aa11.74□□□□□ -0.53
AC009233.1-201ENST00000616477 TSPYL2Q9H2G4 693 aaPredicted RBP11.65□□□□□ -0.54
AC009233.1-201ENST00000616477 MIER1Q8N108 512 aa11.64□□□□□ -0.55
AC009233.1-201ENST00000616477 FKBP8Q14318 412 aa11.57□□□□□ -0.56
AC009233.1-201ENST00000616477 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
AC009233.1-201ENST00000616477 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
AC009233.1-201ENST00000616477 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
AC009233.1-201ENST00000616477 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms