RNA–Protein interactions for RNA: ENST00000616094.1

CREB3L1-205, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

TSL 1 (best)

Gene CREB3L1, Length 1,817 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-205ENST00000616094 NISCHQ9Y2I1 1504 aa27.75■■■□□ 2.03
CREB3L1-205ENST00000616094 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
CREB3L1-205ENST00000616094 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
CREB3L1-205ENST00000616094 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
CREB3L1-205ENST00000616094 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
CREB3L1-205ENST00000616094 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
CREB3L1-205ENST00000616094 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
CREB3L1-205ENST00000616094 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
CREB3L1-205ENST00000616094 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
CREB3L1-205ENST00000616094 ABCC9O60706 1549 aa22.31■■□□□ 1.16
CREB3L1-205ENST00000616094 HRCP23327 699 aa22.3■■□□□ 1.16
CREB3L1-205ENST00000616094 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
CREB3L1-205ENST00000616094 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
CREB3L1-205ENST00000616094 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
CREB3L1-205ENST00000616094 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
CREB3L1-205ENST00000616094 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
CREB3L1-205ENST00000616094 NACADO15069 1562 aa21.77■■□□□ 1.08
CREB3L1-205ENST00000616094 TRIM26Q12899 539 aaPredicted RBP21.7■■□□□ 1.06
CREB3L1-205ENST00000616094 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
CREB3L1-205ENST00000616094 TRIM41Q8WV44 630 aa21.58■■□□□ 1.05
CREB3L1-205ENST00000616094 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
CREB3L1-205ENST00000616094 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
CREB3L1-205ENST00000616094 WIZO95785 1651 aa21.46■■□□□ 1.03
CREB3L1-205ENST00000616094 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
CREB3L1-205ENST00000616094 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
CREB3L1-205ENST00000616094 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
CREB3L1-205ENST00000616094 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
CREB3L1-205ENST00000616094 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
CREB3L1-205ENST00000616094 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
CREB3L1-205ENST00000616094 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
CREB3L1-205ENST00000616094 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
CREB3L1-205ENST00000616094 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
CREB3L1-205ENST00000616094 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
CREB3L1-205ENST00000616094 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
CREB3L1-205ENST00000616094 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
CREB3L1-205ENST00000616094 EEA1Q15075 1411 aa20.85■□□□□ 0.93
CREB3L1-205ENST00000616094 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
CREB3L1-205ENST00000616094 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
CREB3L1-205ENST00000616094 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
CREB3L1-205ENST00000616094 SOGA1O94964 1423 aa20.77■□□□□ 0.92
CREB3L1-205ENST00000616094 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
CREB3L1-205ENST00000616094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
CREB3L1-205ENST00000616094 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
CREB3L1-205ENST00000616094 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
CREB3L1-205ENST00000616094 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
CREB3L1-205ENST00000616094 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
CREB3L1-205ENST00000616094 KIF21BO75037 1637 aa20.62■□□□□ 0.89
CREB3L1-205ENST00000616094 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
CREB3L1-205ENST00000616094 SYNJ1O43426 1573 aa20.58■□□□□ 0.89
CREB3L1-205ENST00000616094 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
CREB3L1-205ENST00000616094 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
CREB3L1-205ENST00000616094 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
CREB3L1-205ENST00000616094 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
CREB3L1-205ENST00000616094 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
CREB3L1-205ENST00000616094 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
CREB3L1-205ENST00000616094 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
CREB3L1-205ENST00000616094 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.86
CREB3L1-205ENST00000616094 ACIN1Q9UKV3 1341 aaKnown RBP20.39■□□□□ 0.85
CREB3L1-205ENST00000616094 CLIP1P30622 1438 aa20.38■□□□□ 0.85
CREB3L1-205ENST00000616094 VPS8Q8N3P4 1428 aa20.37■□□□□ 0.85
CREB3L1-205ENST00000616094 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
CREB3L1-205ENST00000616094 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
CREB3L1-205ENST00000616094 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
CREB3L1-205ENST00000616094 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
CREB3L1-205ENST00000616094 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
CREB3L1-205ENST00000616094 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
CREB3L1-205ENST00000616094 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
CREB3L1-205ENST00000616094 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
CREB3L1-205ENST00000616094 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
CREB3L1-205ENST00000616094 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
CREB3L1-205ENST00000616094 APLP2Q06481 763 aa20.11■□□□□ 0.81
CREB3L1-205ENST00000616094 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
CREB3L1-205ENST00000616094 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
CREB3L1-205ENST00000616094 CUX1P39880 1505 aa20.07■□□□□ 0.8
CREB3L1-205ENST00000616094 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
CREB3L1-205ENST00000616094 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
CREB3L1-205ENST00000616094 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
CREB3L1-205ENST00000616094 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
CREB3L1-205ENST00000616094 CFTRP13569 1480 aa19.96■□□□□ 0.79
CREB3L1-205ENST00000616094 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
CREB3L1-205ENST00000616094 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
CREB3L1-205ENST00000616094 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
CREB3L1-205ENST00000616094 MIER1Q8N108 512 aa19.91■□□□□ 0.78
CREB3L1-205ENST00000616094 CUX2O14529 1486 aa19.9■□□□□ 0.78
CREB3L1-205ENST00000616094 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
CREB3L1-205ENST00000616094 KANK4Q5T7N3 995 aaPredicted RBP19.83■□□□□ 0.77
CREB3L1-205ENST00000616094 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.76
CREB3L1-205ENST00000616094 MAP3K1Q13233 1512 aa19.79■□□□□ 0.76
CREB3L1-205ENST00000616094 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
CREB3L1-205ENST00000616094 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
CREB3L1-205ENST00000616094 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
CREB3L1-205ENST00000616094 IGF1RP08069 1367 aa19.69■□□□□ 0.74
CREB3L1-205ENST00000616094 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
CREB3L1-205ENST00000616094 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
CREB3L1-205ENST00000616094 MAPKBP1O60336 1514 aa19.63■□□□□ 0.73
CREB3L1-205ENST00000616094 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
CREB3L1-205ENST00000616094 LRRC9Q6ZRR7 1453 aa19.61■□□□□ 0.73
CREB3L1-205ENST00000616094 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
CREB3L1-205ENST00000616094 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
CREB3L1-205ENST00000616094 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms