RNA–Protein interactions for RNA: ENST00000614578.1

CENPF-206, Transcript of centromere protein F, humanhuman

TSL 5 BASIC

Gene CENPF, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-206ENST00000614578 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
CENPF-206ENST00000614578 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
CENPF-206ENST00000614578 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
CENPF-206ENST00000614578 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
CENPF-206ENST00000614578 FOXD1Q16676 465 aa12.73□□□□□ -0.37
CENPF-206ENST00000614578 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
CENPF-206ENST00000614578 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
CENPF-206ENST00000614578 ADRA2BP18089 450 aa11.97□□□□□ -0.49
CENPF-206ENST00000614578 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
CENPF-206ENST00000614578 MSH5O43196 834 aa11.84□□□□□ -0.51
CENPF-206ENST00000614578 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
CENPF-206ENST00000614578 MAPK8IP2Q13387 824 aaPredicted RBP10.98□□□□□ -0.65
CENPF-206ENST00000614578 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
CENPF-206ENST00000614578 DMRT2Q9Y5R5 561 aa10.83□□□□□ -0.68
CENPF-206ENST00000614578 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
CENPF-206ENST00000614578 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
CENPF-206ENST00000614578 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
CENPF-206ENST00000614578 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
CENPF-206ENST00000614578 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
CENPF-206ENST00000614578 NCBP3Q53F19 620 aaKnown RBP10.36□□□□□ -0.75
CENPF-206ENST00000614578 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
CENPF-206ENST00000614578 CACNB1Q02641 598 aaPredicted RBP10.16□□□□□ -0.78
CENPF-206ENST00000614578 KCNA4P22459 653 aa10.13□□□□□ -0.79
CENPF-206ENST00000614578 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
CENPF-206ENST00000614578 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
CENPF-206ENST00000614578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■□□□□ 8.7
CENPF-206ENST00000614578 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
CENPF-206ENST00000614578 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
CENPF-206ENST00000614578 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
CENPF-206ENST00000614578 SPINK5Q9NQ38 1064 aaPredicted RBP9.65□□□□□ -0.86
CENPF-206ENST00000614578 CAPN15O75808 1086 aa9.63□□□□□ -0.87
CENPF-206ENST00000614578 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
CENPF-206ENST00000614578 DSG3P32926 999 aa9.53□□□□□ -0.88
CENPF-206ENST00000614578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
CENPF-206ENST00000614578 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
CENPF-206ENST00000614578 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
CENPF-206ENST00000614578 APLP2Q06481 763 aa9.48□□□□□ -0.89
CENPF-206ENST00000614578 SAMD1Q6SPF0 538 aaPredicted RBP9.47□□□□□ -0.89
CENPF-206ENST00000614578 MYCNP04198 464 aaPredicted RBP9.44□□□□□ -0.9
CENPF-206ENST00000614578 ABCB7O75027 752 aa9.43□□□□□ -0.9
CENPF-206ENST00000614578 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
CENPF-206ENST00000614578 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.9
CENPF-206ENST00000614578 ZBTB22O15209 634 aa9.31□□□□□ -0.92
CENPF-206ENST00000614578 ATF5Q9Y2D1 282 aaPredicted RBP9.27□□□□□ -0.93
CENPF-206ENST00000614578 POLA2Q14181 598 aa9.26□□□□□ -0.93
CENPF-206ENST00000614578 ATXN8OSP0DMR3 200 aa9.07□□□□□ -0.96
CENPF-206ENST00000614578 RBM42Q9BTD8 480 aaKnown RBP9.06□□□□□ -0.96
CENPF-206ENST00000614578 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
CENPF-206ENST00000614578 POTEHQ6S545 545 aa8.99□□□□□ -0.97
CENPF-206ENST00000614578 CSRNP3Q8WYN3 585 aa8.96□□□□□ -0.98
CENPF-206ENST00000614578 OSCARQ8IYS5 282 aa8.94□□□□□ -0.98
CENPF-206ENST00000614578 EHMT2Q96KQ7 1210 aa8.92□□□□□ -0.98
CENPF-206ENST00000614578 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
CENPF-206ENST00000614578 FBLN2P98095 1184 aa8.86□□□□□ -0.99
CENPF-206ENST00000614578 CHRDL2Q6WN34 429 aa8.85□□□□□ -0.99
CENPF-206ENST00000614578 MKRN4PQ13434 485 aaPredicted RBP8.82□□□□□ -1
CENPF-206ENST00000614578 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
CENPF-206ENST00000614578 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
CENPF-206ENST00000614578 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
CENPF-206ENST00000614578 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
CENPF-206ENST00000614578 PITPNM1O00562 1244 aa8.72□□□□□ -1.01
CENPF-206ENST00000614578 ZNF692Q9BU19 519 aaPredicted RBP8.71□□□□□ -1.02
CENPF-206ENST00000614578 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
CENPF-206ENST00000614578 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
CENPF-206ENST00000614578 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
CENPF-206ENST00000614578 FXR2P51116 673 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■□□ 18.9
CENPF-206ENST00000614578 SPDYE1Q8NFV5 336 aaPredicted RBP8.6□□□□□ -1.03
CENPF-206ENST00000614578 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
CENPF-206ENST00000614578 HAX1O00165 279 aa8.52□□□□□ -1.05
CENPF-206ENST00000614578 PRKAR2AP13861 404 aaKnown RBP8.51□□□□□ -1.05
CENPF-206ENST00000614578 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
CENPF-206ENST00000614578 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
CENPF-206ENST00000614578 SP7Q8TDD2 431 aaPredicted RBP8.46□□□□□ -1.06
CENPF-206ENST00000614578 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
CENPF-206ENST00000614578 EVX2Q03828 476 aa8.42□□□□□ -1.06
CENPF-206ENST00000614578 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
CENPF-206ENST00000614578 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
CENPF-206ENST00000614578 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
CENPF-206ENST00000614578 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
CENPF-206ENST00000614578 CD44P16070 742 aaKnown RBP8.24□□□□□ -1.09
CENPF-206ENST00000614578 GABBR2O75899 941 aa8.22□□□□□ -1.09
CENPF-206ENST00000614578 PROM2Q8N271 834 aa8.2□□□□□ -1.1
CENPF-206ENST00000614578 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.1
CENPF-206ENST00000614578 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
CENPF-206ENST00000614578 FKBP8Q14318 412 aa8.13□□□□□ -1.11
CENPF-206ENST00000614578 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
CENPF-206ENST00000614578 MIER1Q8N108 512 aa8.09□□□□□ -1.11
CENPF-206ENST00000614578 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
CENPF-206ENST00000614578 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
CENPF-206ENST00000614578 CLCN6P51797 869 aa8.05□□□□□ -1.12
CENPF-206ENST00000614578 POTEIP0CG38 1075 aa8.04□□□□□ -1.12
CENPF-206ENST00000614578 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
CENPF-206ENST00000614578 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
CENPF-206ENST00000614578 GALR2O43603 387 aaPredicted RBP8.02□□□□□ -1.13
CENPF-206ENST00000614578 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
CENPF-206ENST00000614578 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
CENPF-206ENST00000614578 TSPYL2Q9H2G4 693 aaPredicted RBP8.02□□□□□ -1.13
CENPF-206ENST00000614578 LHX8Q68G74 356 aa7.96□□□□□ -1.14
CENPF-206ENST00000614578 RASEFQ8IZ41 740 aa7.94□□□□□ -1.14
CENPF-206ENST00000614578 MS4A3Q96HJ5 214 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms