RNA–Protein interactions for RNA: ENST00000614061.1

AC004477.3-201, humanhuman

BASIC

Gene AC004477.3, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.3-201ENST00000614061 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
AC004477.3-201ENST00000614061 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
AC004477.3-201ENST00000614061 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
AC004477.3-201ENST00000614061 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
AC004477.3-201ENST00000614061 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
AC004477.3-201ENST00000614061 FOXD1Q16676 465 aa20.31■□□□□ 0.84
AC004477.3-201ENST00000614061 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
AC004477.3-201ENST00000614061 ADRA2BP18089 450 aa19.72■□□□□ 0.75
AC004477.3-201ENST00000614061 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
AC004477.3-201ENST00000614061 MSH5O43196 834 aa18.59■□□□□ 0.57
AC004477.3-201ENST00000614061 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
AC004477.3-201ENST00000614061 KCNA4P22459 653 aa18.18■□□□□ 0.5
AC004477.3-201ENST00000614061 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
AC004477.3-201ENST00000614061 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
AC004477.3-201ENST00000614061 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
AC004477.3-201ENST00000614061 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
AC004477.3-201ENST00000614061 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
AC004477.3-201ENST00000614061 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
AC004477.3-201ENST00000614061 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
AC004477.3-201ENST00000614061 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
AC004477.3-201ENST00000614061 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
AC004477.3-201ENST00000614061 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
AC004477.3-201ENST00000614061 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
AC004477.3-201ENST00000614061 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
AC004477.3-201ENST00000614061 ZBTB22O15209 634 aa16.76■□□□□ 0.27
AC004477.3-201ENST00000614061 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
AC004477.3-201ENST00000614061 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
AC004477.3-201ENST00000614061 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
AC004477.3-201ENST00000614061 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
AC004477.3-201ENST00000614061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC004477.3-201ENST00000614061 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
AC004477.3-201ENST00000614061 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
AC004477.3-201ENST00000614061 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
AC004477.3-201ENST00000614061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
AC004477.3-201ENST00000614061 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
AC004477.3-201ENST00000614061 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
AC004477.3-201ENST00000614061 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
AC004477.3-201ENST00000614061 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
AC004477.3-201ENST00000614061 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
AC004477.3-201ENST00000614061 APLP2Q06481 763 aa15.77■□□□□ 0.12
AC004477.3-201ENST00000614061 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
AC004477.3-201ENST00000614061 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
AC004477.3-201ENST00000614061 CAPN15O75808 1086 aa15.57■□□□□ 0.08
AC004477.3-201ENST00000614061 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
AC004477.3-201ENST00000614061 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
AC004477.3-201ENST00000614061 POLA2Q14181 598 aa15.36■□□□□ 0.05
AC004477.3-201ENST00000614061 ABCB7O75027 752 aa15.32■□□□□ 0.04
AC004477.3-201ENST00000614061 DSG3P32926 999 aa15.29■□□□□ 0.04
AC004477.3-201ENST00000614061 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
AC004477.3-201ENST00000614061 FKBP8Q14318 412 aa15.16■□□□□ 0.02
AC004477.3-201ENST00000614061 FBLN2P98095 1184 aa15.13■□□□□ 0.01
AC004477.3-201ENST00000614061 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
AC004477.3-201ENST00000614061 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
AC004477.3-201ENST00000614061 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
AC004477.3-201ENST00000614061 PROM2Q8N271 834 aa14.76□□□□□ -0.05
AC004477.3-201ENST00000614061 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
AC004477.3-201ENST00000614061 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
AC004477.3-201ENST00000614061 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
AC004477.3-201ENST00000614061 ZNF692Q9BU19 519 aaPredicted RBP14.7□□□□□ -0.06
AC004477.3-201ENST00000614061 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
AC004477.3-201ENST00000614061 NISCHQ9Y2I1 1504 aa14.63□□□□□ -0.07
AC004477.3-201ENST00000614061 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
AC004477.3-201ENST00000614061 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
AC004477.3-201ENST00000614061 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
AC004477.3-201ENST00000614061 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
AC004477.3-201ENST00000614061 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
AC004477.3-201ENST00000614061 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
AC004477.3-201ENST00000614061 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
AC004477.3-201ENST00000614061 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
AC004477.3-201ENST00000614061 IFNLR1Q8IU57 520 aaPredicted RBP14.2□□□□□ -0.14
AC004477.3-201ENST00000614061 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
AC004477.3-201ENST00000614061 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
AC004477.3-201ENST00000614061 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
AC004477.3-201ENST00000614061 PITPNM1O00562 1244 aa14.13□□□□□ -0.15
AC004477.3-201ENST00000614061 MIER1Q8N108 512 aa14.12□□□□□ -0.15
AC004477.3-201ENST00000614061 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
AC004477.3-201ENST00000614061 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
AC004477.3-201ENST00000614061 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
AC004477.3-201ENST00000614061 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
AC004477.3-201ENST00000614061 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
AC004477.3-201ENST00000614061 SPOCK2Q92563 424 aa13.97□□□□□ -0.17
AC004477.3-201ENST00000614061 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
AC004477.3-201ENST00000614061 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
AC004477.3-201ENST00000614061 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
AC004477.3-201ENST00000614061 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
AC004477.3-201ENST00000614061 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
AC004477.3-201ENST00000614061 PKD2Q13563 968 aa13.82□□□□□ -0.2
AC004477.3-201ENST00000614061 NUBP1P53384 320 aa13.78□□□□□ -0.2
AC004477.3-201ENST00000614061 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
AC004477.3-201ENST00000614061 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
AC004477.3-201ENST00000614061 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
AC004477.3-201ENST00000614061 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
AC004477.3-201ENST00000614061 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
AC004477.3-201ENST00000614061 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
AC004477.3-201ENST00000614061 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
AC004477.3-201ENST00000614061 GSE1Q14687 1217 aa13.64□□□□□ -0.23
AC004477.3-201ENST00000614061 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
AC004477.3-201ENST00000614061 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
AC004477.3-201ENST00000614061 ABCC9O60706 1549 aa13.59□□□□□ -0.23
AC004477.3-201ENST00000614061 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms