RNA–Protein interactions for RNA: ENST00000613488.2

CU639417.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CU639417.2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU639417.2-201ENST00000613488 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
CU639417.2-201ENST00000613488 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
CU639417.2-201ENST00000613488 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
CU639417.2-201ENST00000613488 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
CU639417.2-201ENST00000613488 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
CU639417.2-201ENST00000613488 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
CU639417.2-201ENST00000613488 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
CU639417.2-201ENST00000613488 TTBK1Q5TCY1 1321 aaPredicted RBP24.44■■□□□ 1.5
CU639417.2-201ENST00000613488 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
CU639417.2-201ENST00000613488 APLP2Q06481 763 aa24.12■■□□□ 1.45
CU639417.2-201ENST00000613488 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
CU639417.2-201ENST00000613488 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.42
CU639417.2-201ENST00000613488 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.41
CU639417.2-201ENST00000613488 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
CU639417.2-201ENST00000613488 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
CU639417.2-201ENST00000613488 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
CU639417.2-201ENST00000613488 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
CU639417.2-201ENST00000613488 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
CU639417.2-201ENST00000613488 HRCP23327 699 aa23.7■■□□□ 1.38
CU639417.2-201ENST00000613488 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
CU639417.2-201ENST00000613488 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
CU639417.2-201ENST00000613488 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
CU639417.2-201ENST00000613488 ATP1B4Q9UN42 357 aaPredicted RBP23.44■■□□□ 1.34
CU639417.2-201ENST00000613488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
CU639417.2-201ENST00000613488 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.28
CU639417.2-201ENST00000613488 ITGAEP38570 1179 aa23.04■■□□□ 1.28
CU639417.2-201ENST00000613488 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
CU639417.2-201ENST00000613488 NEFLP07196 543 aa22.84■■□□□ 1.25
CU639417.2-201ENST00000613488 DIEXFQ68CQ4 756 aaKnown RBP22.76■■□□□ 1.23
CU639417.2-201ENST00000613488 ABCC9O60706 1549 aa22.68■■□□□ 1.22
CU639417.2-201ENST00000613488 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
CU639417.2-201ENST00000613488 CNGB1Q14028 1251 aaPredicted RBP22.55■■□□□ 1.2
CU639417.2-201ENST00000613488 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.19
CU639417.2-201ENST00000613488 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
CU639417.2-201ENST00000613488 MYT1Q01538 1121 aa22.38■■□□□ 1.17
CU639417.2-201ENST00000613488 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
CU639417.2-201ENST00000613488 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
CU639417.2-201ENST00000613488 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
CU639417.2-201ENST00000613488 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
CU639417.2-201ENST00000613488 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
CU639417.2-201ENST00000613488 BCANQ96GW7 911 aa22.2■■□□□ 1.14
CU639417.2-201ENST00000613488 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
CU639417.2-201ENST00000613488 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
CU639417.2-201ENST00000613488 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
CU639417.2-201ENST00000613488 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
CU639417.2-201ENST00000613488 TRIM52Q96A61 297 aa22.08■■□□□ 1.13
CU639417.2-201ENST00000613488 SCRIBQ14160 1630 aa22.08■■□□□ 1.12
CU639417.2-201ENST00000613488 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
CU639417.2-201ENST00000613488 ANP32CO43423 234 aa21.9■■□□□ 1.1
CU639417.2-201ENST00000613488 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
CU639417.2-201ENST00000613488 ARID3CA6NKF2 412 aa21.89■■□□□ 1.09
CU639417.2-201ENST00000613488 DAXXQ9UER7 740 aaPredicted RBP21.89■■□□□ 1.09
CU639417.2-201ENST00000613488 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
CU639417.2-201ENST00000613488 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
CU639417.2-201ENST00000613488 RSF1Q96T23 1441 aaPredicted RBP21.71■■□□□ 1.07
CU639417.2-201ENST00000613488 FBLN2P98095 1184 aa21.71■■□□□ 1.07
CU639417.2-201ENST00000613488 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
CU639417.2-201ENST00000613488 MIER1Q8N108 512 aa21.66■■□□□ 1.06
CU639417.2-201ENST00000613488 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
CU639417.2-201ENST00000613488 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
CU639417.2-201ENST00000613488 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
CU639417.2-201ENST00000613488 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CU639417.2-201ENST00000613488 FKBP8Q14318 412 aa21.59■■□□□ 1.05
CU639417.2-201ENST00000613488 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
CU639417.2-201ENST00000613488 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
CU639417.2-201ENST00000613488 CLIP1P30622 1438 aa21.49■■□□□ 1.03
CU639417.2-201ENST00000613488 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
CU639417.2-201ENST00000613488 CEP162Q5TB80 1403 aa21.48■■□□□ 1.03
CU639417.2-201ENST00000613488 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
CU639417.2-201ENST00000613488 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
CU639417.2-201ENST00000613488 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
CU639417.2-201ENST00000613488 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
CU639417.2-201ENST00000613488 SALL2Q9Y467 1007 aaPredicted RBP21.3■■□□□ 1
CU639417.2-201ENST00000613488 IRX6P78412 446 aaPredicted RBP21.28■■□□□ 1
CU639417.2-201ENST00000613488 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
CU639417.2-201ENST00000613488 GOLGA3Q08378 1498 aa21.27■■□□□ 1
CU639417.2-201ENST00000613488 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
CU639417.2-201ENST00000613488 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
CU639417.2-201ENST00000613488 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
CU639417.2-201ENST00000613488 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
CU639417.2-201ENST00000613488 EEA1Q15075 1411 aa21.2■□□□□ 0.98
CU639417.2-201ENST00000613488 ANP32AP39687 249 aaKnown RBP21.19■□□□□ 0.98
CU639417.2-201ENST00000613488 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
CU639417.2-201ENST00000613488 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
CU639417.2-201ENST00000613488 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
CU639417.2-201ENST00000613488 SOGA1O94964 1423 aa21.15■□□□□ 0.98
CU639417.2-201ENST00000613488 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
CU639417.2-201ENST00000613488 SENP3-EIF4A1A0A087X0R7 540 aa21.13■□□□□ 0.97
CU639417.2-201ENST00000613488 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
CU639417.2-201ENST00000613488 SIN3AQ96ST3 1273 aa21.1■□□□□ 0.97
CU639417.2-201ENST00000613488 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
CU639417.2-201ENST00000613488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.07■□□□□ 0.96
CU639417.2-201ENST00000613488 CCDC136Q96JN2 1154 aa21.05■□□□□ 0.96
CU639417.2-201ENST00000613488 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
CU639417.2-201ENST00000613488 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
CU639417.2-201ENST00000613488 NACADO15069 1562 aa21.01■□□□□ 0.95
CU639417.2-201ENST00000613488 CHGAP10645 457 aaKnown RBP21■□□□□ 0.95
CU639417.2-201ENST00000613488 NBR1Q14596 966 aa20.99■□□□□ 0.95
CU639417.2-201ENST00000613488 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
CU639417.2-201ENST00000613488 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms