RNA–Protein interactions for RNA: ENST00000612770.1

SYNRG-219, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-219ENST00000612770 AEBP2Q6ZN18 517 aaPredicted RBP26.56■■□□□ 1.84
SYNRG-219ENST00000612770 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
SYNRG-219ENST00000612770 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
SYNRG-219ENST00000612770 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
SYNRG-219ENST00000612770 FOXD1Q16676 465 aa21.17■□□□□ 0.98
SYNRG-219ENST00000612770 MSH5O43196 834 aa19.85■□□□□ 0.77
SYNRG-219ENST00000612770 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
SYNRG-219ENST00000612770 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
SYNRG-219ENST00000612770 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
SYNRG-219ENST00000612770 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
SYNRG-219ENST00000612770 ADRA2BP18089 450 aa19.54■□□□□ 0.72
SYNRG-219ENST00000612770 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
SYNRG-219ENST00000612770 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
SYNRG-219ENST00000612770 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
SYNRG-219ENST00000612770 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
SYNRG-219ENST00000612770 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
SYNRG-219ENST00000612770 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
SYNRG-219ENST00000612770 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
SYNRG-219ENST00000612770 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
SYNRG-219ENST00000612770 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
SYNRG-219ENST00000612770 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
SYNRG-219ENST00000612770 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
SYNRG-219ENST00000612770 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
SYNRG-219ENST00000612770 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
SYNRG-219ENST00000612770 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
SYNRG-219ENST00000612770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
SYNRG-219ENST00000612770 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
SYNRG-219ENST00000612770 KCNA4P22459 653 aa15.89■□□□□ 0.13
SYNRG-219ENST00000612770 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
SYNRG-219ENST00000612770 DSG3P32926 999 aa15.8■□□□□ 0.12
SYNRG-219ENST00000612770 CAPN15O75808 1086 aa15.79■□□□□ 0.12
SYNRG-219ENST00000612770 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
SYNRG-219ENST00000612770 TRHP20396 242 aaPredicted RBP15.5■□□□□ 0.07
SYNRG-219ENST00000612770 APLP2Q06481 763 aa15.48■□□□□ 0.07
SYNRG-219ENST00000612770 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
SYNRG-219ENST00000612770 POTEHQ6S545 545 aa15.45■□□□□ 0.06
SYNRG-219ENST00000612770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
SYNRG-219ENST00000612770 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
SYNRG-219ENST00000612770 ABCB7O75027 752 aa15.42■□□□□ 0.06
SYNRG-219ENST00000612770 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
SYNRG-219ENST00000612770 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
SYNRG-219ENST00000612770 POLA2Q14181 598 aa15.05■□□□□ -0
SYNRG-219ENST00000612770 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
SYNRG-219ENST00000612770 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
SYNRG-219ENST00000612770 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
SYNRG-219ENST00000612770 ATF5Q9Y2D1 282 aaPredicted RBP14.87□□□□□ -0.03
SYNRG-219ENST00000612770 CHRDL2Q6WN34 429 aa14.81□□□□□ -0.04
SYNRG-219ENST00000612770 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
SYNRG-219ENST00000612770 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
SYNRG-219ENST00000612770 ZBTB22O15209 634 aa14.62□□□□□ -0.07
SYNRG-219ENST00000612770 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
SYNRG-219ENST00000612770 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
SYNRG-219ENST00000612770 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
SYNRG-219ENST00000612770 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
SYNRG-219ENST00000612770 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
SYNRG-219ENST00000612770 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
SYNRG-219ENST00000612770 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNRG-219ENST00000612770 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
SYNRG-219ENST00000612770 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
SYNRG-219ENST00000612770 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
SYNRG-219ENST00000612770 FBLN2P98095 1184 aa14.23□□□□□ -0.13
SYNRG-219ENST00000612770 HAX1O00165 279 aa14.2□□□□□ -0.14
SYNRG-219ENST00000612770 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
SYNRG-219ENST00000612770 EVX2Q03828 476 aa14.07□□□□□ -0.16
SYNRG-219ENST00000612770 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
SYNRG-219ENST00000612770 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
SYNRG-219ENST00000612770 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
SYNRG-219ENST00000612770 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
SYNRG-219ENST00000612770 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
SYNRG-219ENST00000612770 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
SYNRG-219ENST00000612770 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNRG-219ENST00000612770 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
SYNRG-219ENST00000612770 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
SYNRG-219ENST00000612770 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
SYNRG-219ENST00000612770 GABBR2O75899 941 aa13.72□□□□□ -0.21
SYNRG-219ENST00000612770 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
SYNRG-219ENST00000612770 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
SYNRG-219ENST00000612770 LHX8Q68G74 356 aa13.48□□□□□ -0.25
SYNRG-219ENST00000612770 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
SYNRG-219ENST00000612770 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
SYNRG-219ENST00000612770 CLCN6P51797 869 aa13.4□□□□□ -0.26
SYNRG-219ENST00000612770 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
SYNRG-219ENST00000612770 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
SYNRG-219ENST00000612770 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
SYNRG-219ENST00000612770 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
SYNRG-219ENST00000612770 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
SYNRG-219ENST00000612770 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
SYNRG-219ENST00000612770 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
SYNRG-219ENST00000612770 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
SYNRG-219ENST00000612770 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
SYNRG-219ENST00000612770 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYNRG-219ENST00000612770 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
SYNRG-219ENST00000612770 PROM2Q8N271 834 aa13.04□□□□□ -0.32
SYNRG-219ENST00000612770 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
SYNRG-219ENST00000612770 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
SYNRG-219ENST00000612770 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
SYNRG-219ENST00000612770 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
SYNRG-219ENST00000612770 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
SYNRG-219ENST00000612770 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
SYNRG-219ENST00000612770 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms