RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
SMAD6-205ENST00000612349 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.25
SMAD6-205ENST00000612349 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
SMAD6-205ENST00000612349 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
SMAD6-205ENST00000612349 EHMT2Q96KQ7 1210 aa32.93■■■□□ 2.86
SMAD6-205ENST00000612349 APLP2Q06481 763 aa32.89■■■□□ 2.86
SMAD6-205ENST00000612349 FAM9AQ8IZU1 332 aaPredicted RBP32.68■■■□□ 2.82
SMAD6-205ENST00000612349 PELP1Q8IZL8 1130 aaKnown RBP32.47■■■□□ 2.79
SMAD6-205ENST00000612349 TRIM41Q8WV44 630 aa31.89■■■□□ 2.7
SMAD6-205ENST00000612349 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
SMAD6-205ENST00000612349 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.67
SMAD6-205ENST00000612349 PCGF6Q9BYE7 350 aa31.67■■■□□ 2.66
SMAD6-205ENST00000612349 ATP1B4Q9UN42 357 aaPredicted RBP31.62■■■□□ 2.65
SMAD6-205ENST00000612349 UBTFP17480 764 aaKnown RBP31.55■■■□□ 2.64
SMAD6-205ENST00000612349 ZEB1P37275 1124 aaPredicted RBP31.53■■■□□ 2.64
SMAD6-205ENST00000612349 CCER1Q8TC90 406 aaPredicted RBP31.39■■■□□ 2.61
SMAD6-205ENST00000612349 CENPBP07199 599 aaPredicted RBP31.27■■■□□ 2.6
SMAD6-205ENST00000612349 ERICH6Q7L0X2 663 aa30.88■■■□□ 2.53
SMAD6-205ENST00000612349 NEFLP07196 543 aa30.75■■■□□ 2.51
SMAD6-205ENST00000612349 PPARGC1BQ86YN6 1023 aaKnown RBP30.66■■■□□ 2.5
SMAD6-205ENST00000612349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.64■■■□□ 2.5
SMAD6-205ENST00000612349 HNRNPUL2Q1KMD3 747 aaKnown RBP30.64■■■□□ 2.5
SMAD6-205ENST00000612349 MYT1Q01538 1121 aa30.63■■■□□ 2.49
SMAD6-205ENST00000612349 MYT1LQ9UL68 1186 aa30.59■■■□□ 2.49
SMAD6-205ENST00000612349 TRIM26Q12899 539 aaPredicted RBP30.56■■■□□ 2.48
SMAD6-205ENST00000612349 ABCC9O60706 1549 aa30.55■■■□□ 2.48
SMAD6-205ENST00000612349 CHIC1Q5VXU3 224 aa30.51■■■□□ 2.47
SMAD6-205ENST00000612349 ITGAEP38570 1179 aa30.39■■■□□ 2.46
SMAD6-205ENST00000612349 LOC105371045A0A1W2PR82 267 aa30.38■■■□□ 2.45
SMAD6-205ENST00000612349 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
SMAD6-205ENST00000612349 YTHDC1Q96MU7 727 aaKnown RBP30.36■■■□□ 2.45
SMAD6-205ENST00000612349 POLR3GLQ9BT43 218 aa30.14■■■□□ 2.42
SMAD6-205ENST00000612349 HRCP23327 699 aa30.14■■■□□ 2.42
SMAD6-205ENST00000612349 DAXXQ9UER7 740 aaPredicted RBP29.85■■■□□ 2.37
SMAD6-205ENST00000612349 FAM50AQ14320 339 aaKnown RBP29.74■■■□□ 2.35
SMAD6-205ENST00000612349 SLC4A1APQ9BWU0 796 aaKnown RBP29.71■■■□□ 2.35
SMAD6-205ENST00000612349 CNGB1Q14028 1251 aaPredicted RBP29.66■■■□□ 2.34
SMAD6-205ENST00000612349 TRIM52Q96A61 297 aa29.62■■■□□ 2.33
SMAD6-205ENST00000612349 FBLN2P98095 1184 aa29.46■■■□□ 2.31
SMAD6-205ENST00000612349 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
SMAD6-205ENST00000612349 NEUROD1Q13562 356 aa29.31■■■□□ 2.28
SMAD6-205ENST00000612349 CLSPNQ9HAW4 1339 aa29.28■■■□□ 2.28
SMAD6-205ENST00000612349 CSRNP3Q8WYN3 585 aa29.26■■■□□ 2.27
SMAD6-205ENST00000612349 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
SMAD6-205ENST00000612349 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.27
SMAD6-205ENST00000612349 ZNF326Q5BKZ1 582 aaKnown RBP29.17■■■□□ 2.26
SMAD6-205ENST00000612349 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
SMAD6-205ENST00000612349 CDK11AQ9UQ88 783 aaPredicted RBP29.1■■■□□ 2.25
SMAD6-205ENST00000612349 ANP32CO43423 234 aa29.1■■■□□ 2.25
SMAD6-205ENST00000612349 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
SMAD6-205ENST00000612349 ARID3CA6NKF2 412 aa28.99■■■□□ 2.23
SMAD6-205ENST00000612349 RTL5Q5HYW3 569 aaPredicted RBP28.96■■■□□ 2.23
SMAD6-205ENST00000612349 ZBTB47Q9UFB7 747 aaPredicted RBP28.95■■■□□ 2.23
SMAD6-205ENST00000612349 NEFMP07197 916 aa28.91■■■□□ 2.22
SMAD6-205ENST00000612349 BCANQ96GW7 911 aa28.9■■■□□ 2.22
SMAD6-205ENST00000612349 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
SMAD6-205ENST00000612349 ZNF777Q9ULD5 760 aaPredicted RBP28.88■■■□□ 2.21
SMAD6-205ENST00000612349 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
SMAD6-205ENST00000612349 NPM1P06748 294 aaKnown RBP eCLIP28.74■■■□□ 2.19
SMAD6-205ENST00000612349 GTF3C3Q9Y5Q9 886 aa28.73■■■□□ 2.19
SMAD6-205ENST00000612349 CANXP27824 592 aaKnown RBP28.7■■■□□ 2.19
SMAD6-205ENST00000612349 SLC24A1O60721 1099 aa28.67■■■□□ 2.18
SMAD6-205ENST00000612349 STAG3Q9UJ98 1225 aa28.55■■■□□ 2.16
SMAD6-205ENST00000612349 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
SMAD6-205ENST00000612349 TONSLQ96HA7 1378 aa28.52■■■□□ 2.16
SMAD6-205ENST00000612349 CHGAP10645 457 aaKnown RBP28.48■■■□□ 2.15
SMAD6-205ENST00000612349 ACIN1Q9UKV3 1341 aaKnown RBP28.42■■■□□ 2.14
SMAD6-205ENST00000612349 TSPY4P0CV99 314 aa28.36■■■□□ 2.13
SMAD6-205ENST00000612349 TSPY10P0CW01 314 aa28.36■■■□□ 2.13
SMAD6-205ENST00000612349 BCL11AQ9H165 835 aa28.32■■■□□ 2.12
SMAD6-205ENST00000612349 CHMP7Q8WUX9 453 aaPredicted RBP28.32■■■□□ 2.12
SMAD6-205ENST00000612349 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
SMAD6-205ENST00000612349 NACADO15069 1562 aa28.28■■■□□ 2.12
SMAD6-205ENST00000612349 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
SMAD6-205ENST00000612349 MTUS2Q5JR59 1369 aa28.25■■■□□ 2.11
SMAD6-205ENST00000612349 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
SMAD6-205ENST00000612349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.22■■■□□ 2.11
SMAD6-205ENST00000612349 ANP32AP39687 249 aaKnown RBP28.17■■■□□ 2.1
SMAD6-205ENST00000612349 CLIP1P30622 1438 aa28.16■■■□□ 2.1
SMAD6-205ENST00000612349 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
SMAD6-205ENST00000612349 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
SMAD6-205ENST00000612349 EEA1Q15075 1411 aa28.07■■■□□ 2.08
SMAD6-205ENST00000612349 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
SMAD6-205ENST00000612349 HNRNPUQ00839 825 aaKnown RBP eCLIP28.06■■■□□ 2.08
SMAD6-205ENST00000612349 TMC1Q8TDI8 760 aa28.04■■■□□ 2.08
SMAD6-205ENST00000612349 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.081e-6■■■■■ 58.5
SMAD6-205ENST00000612349 FAM9BQ8IZU0 186 aa28.01■■■□□ 2.07
SMAD6-205ENST00000612349 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
SMAD6-205ENST00000612349 UPF2Q9HAU5 1272 aaKnown RBP27.98■■■□□ 2.07
SMAD6-205ENST00000612349 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.97■■■□□ 2.07
SMAD6-205ENST00000612349 WDR43Q15061 677 aaKnown RBP eCLIP27.96■■■□□ 2.07
SMAD6-205ENST00000612349 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
SMAD6-205ENST00000612349 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
SMAD6-205ENST00000612349 HSP90AA1P07900 732 aaKnown RBP27.9■■■□□ 2.06
SMAD6-205ENST00000612349 FKBP8Q14318 412 aa27.89■■■□□ 2.06
SMAD6-205ENST00000612349 KIF27Q86VH2 1401 aa27.89■■■□□ 2.05
SMAD6-205ENST00000612349 NPM2Q86SE8 214 aaKnown RBP27.89■■■□□ 2.05
SMAD6-205ENST00000612349 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
SMAD6-205ENST00000612349 CEP162Q5TB80 1403 aa27.87■■■□□ 2.05
SMAD6-205ENST00000612349 RRP7BPQ9NSQ0 103 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms