RNA–Protein interactions for RNA: ENST00000611728.1

AC004241.3-201, humanhuman

BASIC

Gene AC004241.3, Length 517 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004241.3-201ENST00000611728 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
AC004241.3-201ENST00000611728 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
AC004241.3-201ENST00000611728 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
AC004241.3-201ENST00000611728 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
AC004241.3-201ENST00000611728 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
AC004241.3-201ENST00000611728 FOXD1Q16676 465 aa19.19■□□□□ 0.66
AC004241.3-201ENST00000611728 ADRA2BP18089 450 aa18.66■□□□□ 0.58
AC004241.3-201ENST00000611728 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
AC004241.3-201ENST00000611728 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
AC004241.3-201ENST00000611728 MSH5O43196 834 aa17.77■□□□□ 0.44
AC004241.3-201ENST00000611728 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
AC004241.3-201ENST00000611728 KCNA4P22459 653 aa17.32■□□□□ 0.36
AC004241.3-201ENST00000611728 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
AC004241.3-201ENST00000611728 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
AC004241.3-201ENST00000611728 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
AC004241.3-201ENST00000611728 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
AC004241.3-201ENST00000611728 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
AC004241.3-201ENST00000611728 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
AC004241.3-201ENST00000611728 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
AC004241.3-201ENST00000611728 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
AC004241.3-201ENST00000611728 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
AC004241.3-201ENST00000611728 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
AC004241.3-201ENST00000611728 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
AC004241.3-201ENST00000611728 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
AC004241.3-201ENST00000611728 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
AC004241.3-201ENST00000611728 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
AC004241.3-201ENST00000611728 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
AC004241.3-201ENST00000611728 ZBTB22O15209 634 aa15.9■□□□□ 0.14
AC004241.3-201ENST00000611728 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
AC004241.3-201ENST00000611728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
AC004241.3-201ENST00000611728 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
AC004241.3-201ENST00000611728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
AC004241.3-201ENST00000611728 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
AC004241.3-201ENST00000611728 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
AC004241.3-201ENST00000611728 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
AC004241.3-201ENST00000611728 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
AC004241.3-201ENST00000611728 APLP2Q06481 763 aa15.19■□□□□ 0.02
AC004241.3-201ENST00000611728 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
AC004241.3-201ENST00000611728 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
AC004241.3-201ENST00000611728 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
AC004241.3-201ENST00000611728 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
AC004241.3-201ENST00000611728 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
AC004241.3-201ENST00000611728 CAPN15O75808 1086 aa14.84□□□□□ -0.03
AC004241.3-201ENST00000611728 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
AC004241.3-201ENST00000611728 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
AC004241.3-201ENST00000611728 POLA2Q14181 598 aa14.61□□□□□ -0.07
AC004241.3-201ENST00000611728 FKBP8Q14318 412 aa14.55□□□□□ -0.08
AC004241.3-201ENST00000611728 ABCB7O75027 752 aa14.54□□□□□ -0.08
AC004241.3-201ENST00000611728 FBLN2P98095 1184 aa14.53□□□□□ -0.08
AC004241.3-201ENST00000611728 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
AC004241.3-201ENST00000611728 DSG3P32926 999 aa14.48□□□□□ -0.09
AC004241.3-201ENST00000611728 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
AC004241.3-201ENST00000611728 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
AC004241.3-201ENST00000611728 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
AC004241.3-201ENST00000611728 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
AC004241.3-201ENST00000611728 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
AC004241.3-201ENST00000611728 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
AC004241.3-201ENST00000611728 PROM2Q8N271 834 aa14.05□□□□□ -0.16
AC004241.3-201ENST00000611728 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
AC004241.3-201ENST00000611728 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
AC004241.3-201ENST00000611728 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
AC004241.3-201ENST00000611728 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
AC004241.3-201ENST00000611728 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
AC004241.3-201ENST00000611728 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
AC004241.3-201ENST00000611728 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
AC004241.3-201ENST00000611728 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
AC004241.3-201ENST00000611728 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
AC004241.3-201ENST00000611728 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
AC004241.3-201ENST00000611728 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
AC004241.3-201ENST00000611728 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
AC004241.3-201ENST00000611728 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
AC004241.3-201ENST00000611728 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
AC004241.3-201ENST00000611728 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
AC004241.3-201ENST00000611728 MIER1Q8N108 512 aa13.52□□□□□ -0.25
AC004241.3-201ENST00000611728 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
AC004241.3-201ENST00000611728 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
AC004241.3-201ENST00000611728 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
AC004241.3-201ENST00000611728 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
AC004241.3-201ENST00000611728 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
AC004241.3-201ENST00000611728 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
AC004241.3-201ENST00000611728 POTEHQ6S545 545 aa13.38□□□□□ -0.27
AC004241.3-201ENST00000611728 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
AC004241.3-201ENST00000611728 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
AC004241.3-201ENST00000611728 PKD2Q13563 968 aa13.2□□□□□ -0.3
AC004241.3-201ENST00000611728 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
AC004241.3-201ENST00000611728 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
AC004241.3-201ENST00000611728 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC004241.3-201ENST00000611728 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
AC004241.3-201ENST00000611728 GSE1Q14687 1217 aa13.12□□□□□ -0.31
AC004241.3-201ENST00000611728 NUBP1P53384 320 aa13.11□□□□□ -0.31
AC004241.3-201ENST00000611728 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
AC004241.3-201ENST00000611728 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
AC004241.3-201ENST00000611728 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
AC004241.3-201ENST00000611728 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
AC004241.3-201ENST00000611728 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
AC004241.3-201ENST00000611728 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC004241.3-201ENST00000611728 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
AC004241.3-201ENST00000611728 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
AC004241.3-201ENST00000611728 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
AC004241.3-201ENST00000611728 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms