RNA–Protein interactions for RNA: ENST00000611343.1

AC012409.3-201, humanhuman

BASIC

Gene AC012409.3, Length 981 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.3-201ENST00000611343 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
AC012409.3-201ENST00000611343 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
AC012409.3-201ENST00000611343 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
AC012409.3-201ENST00000611343 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
AC012409.3-201ENST00000611343 FOXD1Q16676 465 aa22.74■■□□□ 1.23
AC012409.3-201ENST00000611343 POTEDQ86YR6 584 aa21.28■■□□□ 1
AC012409.3-201ENST00000611343 MSH5O43196 834 aa21.26■□□□□ 0.99
AC012409.3-201ENST00000611343 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
AC012409.3-201ENST00000611343 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
AC012409.3-201ENST00000611343 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
AC012409.3-201ENST00000611343 ADRA2BP18089 450 aa21.01■□□□□ 0.95
AC012409.3-201ENST00000611343 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
AC012409.3-201ENST00000611343 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
AC012409.3-201ENST00000611343 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
AC012409.3-201ENST00000611343 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
AC012409.3-201ENST00000611343 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
AC012409.3-201ENST00000611343 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
AC012409.3-201ENST00000611343 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
AC012409.3-201ENST00000611343 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
AC012409.3-201ENST00000611343 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
AC012409.3-201ENST00000611343 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
AC012409.3-201ENST00000611343 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
AC012409.3-201ENST00000611343 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
AC012409.3-201ENST00000611343 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
AC012409.3-201ENST00000611343 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
AC012409.3-201ENST00000611343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
AC012409.3-201ENST00000611343 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
AC012409.3-201ENST00000611343 KCNA4P22459 653 aa17.09■□□□□ 0.33
AC012409.3-201ENST00000611343 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
AC012409.3-201ENST00000611343 DSG3P32926 999 aa16.97■□□□□ 0.31
AC012409.3-201ENST00000611343 CAPN15O75808 1086 aa16.95■□□□□ 0.3
AC012409.3-201ENST00000611343 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
AC012409.3-201ENST00000611343 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
AC012409.3-201ENST00000611343 POTEHQ6S545 545 aa16.6■□□□□ 0.25
AC012409.3-201ENST00000611343 ABCB7O75027 752 aa16.59■□□□□ 0.25
AC012409.3-201ENST00000611343 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
AC012409.3-201ENST00000611343 APLP2Q06481 763 aa16.51■□□□□ 0.23
AC012409.3-201ENST00000611343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
AC012409.3-201ENST00000611343 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
AC012409.3-201ENST00000611343 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
AC012409.3-201ENST00000611343 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
AC012409.3-201ENST00000611343 POLA2Q14181 598 aa16.16■□□□□ 0.18
AC012409.3-201ENST00000611343 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
AC012409.3-201ENST00000611343 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
AC012409.3-201ENST00000611343 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
AC012409.3-201ENST00000611343 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
AC012409.3-201ENST00000611343 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
AC012409.3-201ENST00000611343 ZBTB22O15209 634 aa15.76■□□□□ 0.11
AC012409.3-201ENST00000611343 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
AC012409.3-201ENST00000611343 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
AC012409.3-201ENST00000611343 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
AC012409.3-201ENST00000611343 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
AC012409.3-201ENST00000611343 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
AC012409.3-201ENST00000611343 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
AC012409.3-201ENST00000611343 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
AC012409.3-201ENST00000611343 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
AC012409.3-201ENST00000611343 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.05
AC012409.3-201ENST00000611343 HAX1O00165 279 aa15.25■□□□□ 0.03
AC012409.3-201ENST00000611343 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
AC012409.3-201ENST00000611343 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
AC012409.3-201ENST00000611343 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
AC012409.3-201ENST00000611343 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
AC012409.3-201ENST00000611343 FBLN2P98095 1184 aa15.22■□□□□ 0.03
AC012409.3-201ENST00000611343 EVX2Q03828 476 aa15.17■□□□□ 0.02
AC012409.3-201ENST00000611343 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
AC012409.3-201ENST00000611343 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
AC012409.3-201ENST00000611343 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
AC012409.3-201ENST00000611343 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
AC012409.3-201ENST00000611343 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
AC012409.3-201ENST00000611343 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
AC012409.3-201ENST00000611343 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
AC012409.3-201ENST00000611343 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
AC012409.3-201ENST00000611343 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
AC012409.3-201ENST00000611343 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
AC012409.3-201ENST00000611343 GABBR2O75899 941 aa14.73□□□□□ -0.05
AC012409.3-201ENST00000611343 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
AC012409.3-201ENST00000611343 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
AC012409.3-201ENST00000611343 POTEIP0CG38 1075 aa14.48□□□□□ -0.09
AC012409.3-201ENST00000611343 LHX8Q68G74 356 aa14.47□□□□□ -0.09
AC012409.3-201ENST00000611343 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
AC012409.3-201ENST00000611343 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
AC012409.3-201ENST00000611343 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
AC012409.3-201ENST00000611343 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
AC012409.3-201ENST00000611343 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
AC012409.3-201ENST00000611343 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
AC012409.3-201ENST00000611343 CLCN6P51797 869 aa14.27□□□□□ -0.13
AC012409.3-201ENST00000611343 DCBLD2Q96PD2 775 aa14.21□□□□□ -0.13
AC012409.3-201ENST00000611343 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
AC012409.3-201ENST00000611343 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
AC012409.3-201ENST00000611343 PHF12Q96QT6 1004 aa14.1□□□□□ -0.15
AC012409.3-201ENST00000611343 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
AC012409.3-201ENST00000611343 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
AC012409.3-201ENST00000611343 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
AC012409.3-201ENST00000611343 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
AC012409.3-201ENST00000611343 PROM2Q8N271 834 aa13.97□□□□□ -0.17
AC012409.3-201ENST00000611343 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
AC012409.3-201ENST00000611343 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
AC012409.3-201ENST00000611343 ASTLQ6HA08 431 aaPredicted RBP13.84□□□□□ -0.19
AC012409.3-201ENST00000611343 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
AC012409.3-201ENST00000611343 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms