RNA–Protein interactions for RNA: ENST00000609911.1

AP000904.1-201, humanhuman

TSL 3 BASIC

Gene AP000904.1, Length 951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000904.1-201ENST00000609911 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
AP000904.1-201ENST00000609911 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
AP000904.1-201ENST00000609911 SENP3Q9H4L4 574 aaPredicted RBP18.37■□□□□ 0.53
AP000904.1-201ENST00000609911 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
AP000904.1-201ENST00000609911 FOXD1Q16676 465 aa17.05■□□□□ 0.32
AP000904.1-201ENST00000609911 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
AP000904.1-201ENST00000609911 MSH5O43196 834 aa16.04■□□□□ 0.16
AP000904.1-201ENST00000609911 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
AP000904.1-201ENST00000609911 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
AP000904.1-201ENST00000609911 ADRA2BP18089 450 aa15.87■□□□□ 0.13
AP000904.1-201ENST00000609911 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
AP000904.1-201ENST00000609911 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
AP000904.1-201ENST00000609911 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
AP000904.1-201ENST00000609911 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
AP000904.1-201ENST00000609911 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
AP000904.1-201ENST00000609911 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
AP000904.1-201ENST00000609911 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
AP000904.1-201ENST00000609911 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
AP000904.1-201ENST00000609911 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
AP000904.1-201ENST00000609911 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
AP000904.1-201ENST00000609911 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
AP000904.1-201ENST00000609911 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
AP000904.1-201ENST00000609911 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
AP000904.1-201ENST00000609911 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
AP000904.1-201ENST00000609911 C1QBPQ07021 282 aaKnown RBP13.48□□□□□ -0.25
AP000904.1-201ENST00000609911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
AP000904.1-201ENST00000609911 KCNA4P22459 653 aa13.21□□□□□ -0.29
AP000904.1-201ENST00000609911 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
AP000904.1-201ENST00000609911 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
AP000904.1-201ENST00000609911 CAPN15O75808 1086 aa12.86□□□□□ -0.35
AP000904.1-201ENST00000609911 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
AP000904.1-201ENST00000609911 APLP2Q06481 763 aa12.78□□□□□ -0.36
AP000904.1-201ENST00000609911 DSG3P32926 999 aa12.76□□□□□ -0.37
AP000904.1-201ENST00000609911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
AP000904.1-201ENST00000609911 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
AP000904.1-201ENST00000609911 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
AP000904.1-201ENST00000609911 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
AP000904.1-201ENST00000609911 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
AP000904.1-201ENST00000609911 ABCB7O75027 752 aa12.53□□□□□ -0.4
AP000904.1-201ENST00000609911 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
AP000904.1-201ENST00000609911 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
AP000904.1-201ENST00000609911 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
AP000904.1-201ENST00000609911 POLA2Q14181 598 aa12.29□□□□□ -0.44
AP000904.1-201ENST00000609911 POTEHQ6S545 545 aa12.26□□□□□ -0.45
AP000904.1-201ENST00000609911 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
AP000904.1-201ENST00000609911 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
AP000904.1-201ENST00000609911 ZBTB22O15209 634 aa12.12□□□□□ -0.47
AP000904.1-201ENST00000609911 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
AP000904.1-201ENST00000609911 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
AP000904.1-201ENST00000609911 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
AP000904.1-201ENST00000609911 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
AP000904.1-201ENST00000609911 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
AP000904.1-201ENST00000609911 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
AP000904.1-201ENST00000609911 FBLN2P98095 1184 aa11.79□□□□□ -0.52
AP000904.1-201ENST00000609911 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
AP000904.1-201ENST00000609911 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
AP000904.1-201ENST00000609911 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
AP000904.1-201ENST00000609911 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
AP000904.1-201ENST00000609911 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
AP000904.1-201ENST00000609911 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
AP000904.1-201ENST00000609911 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
AP000904.1-201ENST00000609911 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
AP000904.1-201ENST00000609911 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
AP000904.1-201ENST00000609911 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
AP000904.1-201ENST00000609911 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
AP000904.1-201ENST00000609911 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
AP000904.1-201ENST00000609911 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
AP000904.1-201ENST00000609911 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
AP000904.1-201ENST00000609911 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
AP000904.1-201ENST00000609911 HAX1O00165 279 aa11.45□□□□□ -0.58
AP000904.1-201ENST00000609911 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
AP000904.1-201ENST00000609911 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
AP000904.1-201ENST00000609911 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
AP000904.1-201ENST00000609911 EVX2Q03828 476 aa11.23□□□□□ -0.61
AP000904.1-201ENST00000609911 CHADLQ6NUI6 762 aa11.21□□□□□ -0.61
AP000904.1-201ENST00000609911 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
AP000904.1-201ENST00000609911 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
AP000904.1-201ENST00000609911 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
AP000904.1-201ENST00000609911 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
AP000904.1-201ENST00000609911 GABBR2O75899 941 aa11.03□□□□□ -0.64
AP000904.1-201ENST00000609911 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
AP000904.1-201ENST00000609911 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
AP000904.1-201ENST00000609911 CLCN6P51797 869 aa10.94□□□□□ -0.66
AP000904.1-201ENST00000609911 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
AP000904.1-201ENST00000609911 ZRANB1Q9UGI0 708 aa10.86□□□□□ -0.67
AP000904.1-201ENST00000609911 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
AP000904.1-201ENST00000609911 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
AP000904.1-201ENST00000609911 PROM2Q8N271 834 aa10.82□□□□□ -0.68
AP000904.1-201ENST00000609911 LHX8Q68G74 356 aa10.78□□□□□ -0.68
AP000904.1-201ENST00000609911 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
AP000904.1-201ENST00000609911 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
AP000904.1-201ENST00000609911 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
AP000904.1-201ENST00000609911 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
AP000904.1-201ENST00000609911 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
AP000904.1-201ENST00000609911 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
AP000904.1-201ENST00000609911 MIER1Q8N108 512 aa10.6□□□□□ -0.71
AP000904.1-201ENST00000609911 FKBP8Q14318 412 aa10.58□□□□□ -0.72
AP000904.1-201ENST00000609911 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
AP000904.1-201ENST00000609911 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
AP000904.1-201ENST00000609911 PLCD3Q8N3E9 789 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms