RNA–Protein interactions for RNA: ENST00000608228.1

AC110609.1-201, humanhuman

TSL 3 BASIC

Gene AC110609.1, Length 303 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC110609.1-201ENST00000608228 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
AC110609.1-201ENST00000608228 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
AC110609.1-201ENST00000608228 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
AC110609.1-201ENST00000608228 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
AC110609.1-201ENST00000608228 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
AC110609.1-201ENST00000608228 FOXD1Q16676 465 aa17.28■□□□□ 0.36
AC110609.1-201ENST00000608228 ADRA2BP18089 450 aa16.78■□□□□ 0.28
AC110609.1-201ENST00000608228 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
AC110609.1-201ENST00000608228 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
AC110609.1-201ENST00000608228 MSH5O43196 834 aa15.91■□□□□ 0.14
AC110609.1-201ENST00000608228 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
AC110609.1-201ENST00000608228 KCNA4P22459 653 aa15.49■□□□□ 0.07
AC110609.1-201ENST00000608228 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
AC110609.1-201ENST00000608228 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
AC110609.1-201ENST00000608228 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
AC110609.1-201ENST00000608228 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
AC110609.1-201ENST00000608228 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
AC110609.1-201ENST00000608228 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
AC110609.1-201ENST00000608228 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
AC110609.1-201ENST00000608228 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
AC110609.1-201ENST00000608228 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
AC110609.1-201ENST00000608228 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
AC110609.1-201ENST00000608228 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
AC110609.1-201ENST00000608228 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
AC110609.1-201ENST00000608228 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
AC110609.1-201ENST00000608228 ZBTB22O15209 634 aa14.24□□□□□ -0.13
AC110609.1-201ENST00000608228 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
AC110609.1-201ENST00000608228 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
AC110609.1-201ENST00000608228 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
AC110609.1-201ENST00000608228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
AC110609.1-201ENST00000608228 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
AC110609.1-201ENST00000608228 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
AC110609.1-201ENST00000608228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
AC110609.1-201ENST00000608228 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
AC110609.1-201ENST00000608228 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
AC110609.1-201ENST00000608228 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
AC110609.1-201ENST00000608228 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
AC110609.1-201ENST00000608228 APLP2Q06481 763 aa13.57□□□□□ -0.24
AC110609.1-201ENST00000608228 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
AC110609.1-201ENST00000608228 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
AC110609.1-201ENST00000608228 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
AC110609.1-201ENST00000608228 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
AC110609.1-201ENST00000608228 CAPN15O75808 1086 aa13.29□□□□□ -0.28
AC110609.1-201ENST00000608228 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
AC110609.1-201ENST00000608228 POLA2Q14181 598 aa13.12□□□□□ -0.31
AC110609.1-201ENST00000608228 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
AC110609.1-201ENST00000608228 DSG3P32926 999 aa13.04□□□□□ -0.32
AC110609.1-201ENST00000608228 ABCB7O75027 752 aa13.03□□□□□ -0.32
AC110609.1-201ENST00000608228 FBLN2P98095 1184 aa12.97□□□□□ -0.33
AC110609.1-201ENST00000608228 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
AC110609.1-201ENST00000608228 FKBP8Q14318 412 aa12.95□□□□□ -0.34
AC110609.1-201ENST00000608228 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
AC110609.1-201ENST00000608228 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
AC110609.1-201ENST00000608228 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
AC110609.1-201ENST00000608228 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
AC110609.1-201ENST00000608228 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
AC110609.1-201ENST00000608228 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
AC110609.1-201ENST00000608228 PROM2Q8N271 834 aa12.6□□□□□ -0.39
AC110609.1-201ENST00000608228 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
AC110609.1-201ENST00000608228 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
AC110609.1-201ENST00000608228 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
AC110609.1-201ENST00000608228 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
AC110609.1-201ENST00000608228 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC110609.1-201ENST00000608228 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
AC110609.1-201ENST00000608228 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
AC110609.1-201ENST00000608228 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
AC110609.1-201ENST00000608228 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
AC110609.1-201ENST00000608228 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
AC110609.1-201ENST00000608228 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
AC110609.1-201ENST00000608228 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
AC110609.1-201ENST00000608228 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
AC110609.1-201ENST00000608228 MIER1Q8N108 512 aa12.09□□□□□ -0.47
AC110609.1-201ENST00000608228 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
AC110609.1-201ENST00000608228 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
AC110609.1-201ENST00000608228 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
AC110609.1-201ENST00000608228 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
AC110609.1-201ENST00000608228 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
AC110609.1-201ENST00000608228 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
AC110609.1-201ENST00000608228 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
AC110609.1-201ENST00000608228 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
AC110609.1-201ENST00000608228 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
AC110609.1-201ENST00000608228 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
AC110609.1-201ENST00000608228 CHRDL2Q6WN34 429 aa11.82□□□□□ -0.52
AC110609.1-201ENST00000608228 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
AC110609.1-201ENST00000608228 PKD2Q13563 968 aa11.79□□□□□ -0.52
AC110609.1-201ENST00000608228 NUBP1P53384 320 aa11.76□□□□□ -0.53
AC110609.1-201ENST00000608228 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
AC110609.1-201ENST00000608228 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
AC110609.1-201ENST00000608228 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
AC110609.1-201ENST00000608228 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
AC110609.1-201ENST00000608228 GSE1Q14687 1217 aa11.71□□□□□ -0.53
AC110609.1-201ENST00000608228 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
AC110609.1-201ENST00000608228 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
AC110609.1-201ENST00000608228 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
AC110609.1-201ENST00000608228 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
AC110609.1-201ENST00000608228 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
AC110609.1-201ENST00000608228 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
AC110609.1-201ENST00000608228 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
AC110609.1-201ENST00000608228 RGL2O15211 777 aa11.55□□□□□ -0.56
AC110609.1-201ENST00000608228 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms