RNA–Protein interactions for RNA: ENST00000607255.1

RNU4-5P-201, Transcript of RNA, U4 small nuclear 5, pseudogene, humanhuman

BASIC

Gene RNU4-5P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-5P-201ENST00000607255 AEBP2Q6ZN18 517 aaPredicted RBP30.39■■■□□ 2.46
RNU4-5P-201ENST00000607255 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
RNU4-5P-201ENST00000607255 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
RNU4-5P-201ENST00000607255 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
RNU4-5P-201ENST00000607255 FOXD1Q16676 465 aa24.18■■□□□ 1.46
RNU4-5P-201ENST00000607255 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
RNU4-5P-201ENST00000607255 MSH5O43196 834 aa22.65■■□□□ 1.22
RNU4-5P-201ENST00000607255 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
RNU4-5P-201ENST00000607255 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
RNU4-5P-201ENST00000607255 ADRA2BP18089 450 aa22.42■■□□□ 1.18
RNU4-5P-201ENST00000607255 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
RNU4-5P-201ENST00000607255 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
RNU4-5P-201ENST00000607255 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
RNU4-5P-201ENST00000607255 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
RNU4-5P-201ENST00000607255 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
RNU4-5P-201ENST00000607255 HOXD11P31277 338 aaPredicted RBP19.74■□□□□ 0.75
RNU4-5P-201ENST00000607255 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
RNU4-5P-201ENST00000607255 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
RNU4-5P-201ENST00000607255 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
RNU4-5P-201ENST00000607255 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
RNU4-5P-201ENST00000607255 RNF39Q9H2S5 420 aa19.34■□□□□ 0.69
RNU4-5P-201ENST00000607255 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
RNU4-5P-201ENST00000607255 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
RNU4-5P-201ENST00000607255 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
RNU4-5P-201ENST00000607255 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
RNU4-5P-201ENST00000607255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
RNU4-5P-201ENST00000607255 KCNA4P22459 653 aa18.51■□□□□ 0.55
RNU4-5P-201ENST00000607255 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
RNU4-5P-201ENST00000607255 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
RNU4-5P-201ENST00000607255 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
RNU4-5P-201ENST00000607255 CAPN15O75808 1086 aa18.11■□□□□ 0.49
RNU4-5P-201ENST00000607255 DSG3P32926 999 aa18.06■□□□□ 0.48
RNU4-5P-201ENST00000607255 APLP2Q06481 763 aa17.82■□□□□ 0.44
RNU4-5P-201ENST00000607255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
RNU4-5P-201ENST00000607255 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
RNU4-5P-201ENST00000607255 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
RNU4-5P-201ENST00000607255 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
RNU4-5P-201ENST00000607255 ABCB7O75027 752 aa17.69■□□□□ 0.42
RNU4-5P-201ENST00000607255 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
RNU4-5P-201ENST00000607255 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
RNU4-5P-201ENST00000607255 POTEHQ6S545 545 aa17.46■□□□□ 0.39
RNU4-5P-201ENST00000607255 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
RNU4-5P-201ENST00000607255 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
RNU4-5P-201ENST00000607255 POLA2Q14181 598 aa17.29■□□□□ 0.36
RNU4-5P-201ENST00000607255 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
RNU4-5P-201ENST00000607255 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
RNU4-5P-201ENST00000607255 ZBTB22O15209 634 aa17.04■□□□□ 0.32
RNU4-5P-201ENST00000607255 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
RNU4-5P-201ENST00000607255 CHRDL2Q6WN34 429 aa16.9■□□□□ 0.3
RNU4-5P-201ENST00000607255 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
RNU4-5P-201ENST00000607255 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
RNU4-5P-201ENST00000607255 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
RNU4-5P-201ENST00000607255 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
RNU4-5P-201ENST00000607255 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
RNU4-5P-201ENST00000607255 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
RNU4-5P-201ENST00000607255 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RNU4-5P-201ENST00000607255 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
RNU4-5P-201ENST00000607255 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
RNU4-5P-201ENST00000607255 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
RNU4-5P-201ENST00000607255 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
RNU4-5P-201ENST00000607255 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
RNU4-5P-201ENST00000607255 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
RNU4-5P-201ENST00000607255 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
RNU4-5P-201ENST00000607255 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
RNU4-5P-201ENST00000607255 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
RNU4-5P-201ENST00000607255 HAX1O00165 279 aa16.17■□□□□ 0.18
RNU4-5P-201ENST00000607255 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
RNU4-5P-201ENST00000607255 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
RNU4-5P-201ENST00000607255 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
RNU4-5P-201ENST00000607255 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
RNU4-5P-201ENST00000607255 EVX2Q03828 476 aa16.01■□□□□ 0.15
RNU4-5P-201ENST00000607255 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
RNU4-5P-201ENST00000607255 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
RNU4-5P-201ENST00000607255 CHADLQ6NUI6 762 aa15.84■□□□□ 0.13
RNU4-5P-201ENST00000607255 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
RNU4-5P-201ENST00000607255 GABBR2O75899 941 aa15.63■□□□□ 0.09
RNU4-5P-201ENST00000607255 FARP1Q9Y4F1 1045 aaPredicted RBP15.59■□□□□ 0.09
RNU4-5P-201ENST00000607255 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
RNU4-5P-201ENST00000607255 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
RNU4-5P-201ENST00000607255 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
RNU4-5P-201ENST00000607255 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
RNU4-5P-201ENST00000607255 POTEIP0CG38 1075 aa15.32■□□□□ 0.04
RNU4-5P-201ENST00000607255 CLCN6P51797 869 aa15.32■□□□□ 0.04
RNU4-5P-201ENST00000607255 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
RNU4-5P-201ENST00000607255 LHX8Q68G74 356 aa15.28■□□□□ 0.04
RNU4-5P-201ENST00000607255 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
RNU4-5P-201ENST00000607255 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
RNU4-5P-201ENST00000607255 PROM2Q8N271 834 aa15.17■□□□□ 0.02
RNU4-5P-201ENST00000607255 DCBLD2Q96PD2 775 aa15.15■□□□□ 0.02
RNU4-5P-201ENST00000607255 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
RNU4-5P-201ENST00000607255 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
RNU4-5P-201ENST00000607255 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
RNU4-5P-201ENST00000607255 PHF12Q96QT6 1004 aa15.08■□□□□ 0
RNU4-5P-201ENST00000607255 MS4A3Q96HJ5 214 aa14.88□□□□□ -0.03
RNU4-5P-201ENST00000607255 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
RNU4-5P-201ENST00000607255 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
RNU4-5P-201ENST00000607255 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
RNU4-5P-201ENST00000607255 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
RNU4-5P-201ENST00000607255 ASTLQ6HA08 431 aaPredicted RBP14.81□□□□□ -0.04
RNU4-5P-201ENST00000607255 MIER1Q8N108 512 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms