RNA–Protein interactions for RNA: ENST00000606980.1

AP002360.4-201, humanhuman

BASIC

Gene AP002360.4, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002360.4-201ENST00000606980 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
AP002360.4-201ENST00000606980 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
AP002360.4-201ENST00000606980 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
AP002360.4-201ENST00000606980 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
AP002360.4-201ENST00000606980 FOXD1Q16676 465 aa24.09■■□□□ 1.45
AP002360.4-201ENST00000606980 MSH5O43196 834 aa22.64■■□□□ 1.21
AP002360.4-201ENST00000606980 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
AP002360.4-201ENST00000606980 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
AP002360.4-201ENST00000606980 PIAS4Q8N2W9 510 aaPredicted RBP22.46■■□□□ 1.19
AP002360.4-201ENST00000606980 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
AP002360.4-201ENST00000606980 ADRA2BP18089 450 aa22.27■■□□□ 1.16
AP002360.4-201ENST00000606980 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
AP002360.4-201ENST00000606980 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
AP002360.4-201ENST00000606980 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
AP002360.4-201ENST00000606980 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
AP002360.4-201ENST00000606980 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
AP002360.4-201ENST00000606980 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
AP002360.4-201ENST00000606980 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
AP002360.4-201ENST00000606980 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
AP002360.4-201ENST00000606980 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
AP002360.4-201ENST00000606980 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
AP002360.4-201ENST00000606980 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
AP002360.4-201ENST00000606980 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
AP002360.4-201ENST00000606980 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
AP002360.4-201ENST00000606980 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
AP002360.4-201ENST00000606980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
AP002360.4-201ENST00000606980 U3KPZ7 1027 aaPredicted RBP18.24■□□□□ 0.51
AP002360.4-201ENST00000606980 KCNA4P22459 653 aa18.12■□□□□ 0.49
AP002360.4-201ENST00000606980 CAPN15O75808 1086 aa18.06■□□□□ 0.48
AP002360.4-201ENST00000606980 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
AP002360.4-201ENST00000606980 DSG3P32926 999 aa17.98■□□□□ 0.47
AP002360.4-201ENST00000606980 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
AP002360.4-201ENST00000606980 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
AP002360.4-201ENST00000606980 APLP2Q06481 763 aa17.71■□□□□ 0.43
AP002360.4-201ENST00000606980 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
AP002360.4-201ENST00000606980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
AP002360.4-201ENST00000606980 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
AP002360.4-201ENST00000606980 ABCB7O75027 752 aa17.62■□□□□ 0.41
AP002360.4-201ENST00000606980 POTEHQ6S545 545 aa17.6■□□□□ 0.41
AP002360.4-201ENST00000606980 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
AP002360.4-201ENST00000606980 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
AP002360.4-201ENST00000606980 POLA2Q14181 598 aa17.17■□□□□ 0.34
AP002360.4-201ENST00000606980 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
AP002360.4-201ENST00000606980 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
AP002360.4-201ENST00000606980 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
AP002360.4-201ENST00000606980 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
AP002360.4-201ENST00000606980 CHRDL2Q6WN34 429 aa16.9■□□□□ 0.3
AP002360.4-201ENST00000606980 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
AP002360.4-201ENST00000606980 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
AP002360.4-201ENST00000606980 ZBTB22O15209 634 aa16.65■□□□□ 0.26
AP002360.4-201ENST00000606980 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
AP002360.4-201ENST00000606980 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
AP002360.4-201ENST00000606980 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
AP002360.4-201ENST00000606980 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
AP002360.4-201ENST00000606980 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
AP002360.4-201ENST00000606980 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
AP002360.4-201ENST00000606980 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
AP002360.4-201ENST00000606980 FBLN2P98095 1184 aa16.29■□□□□ 0.2
AP002360.4-201ENST00000606980 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
AP002360.4-201ENST00000606980 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
AP002360.4-201ENST00000606980 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
AP002360.4-201ENST00000606980 HAX1O00165 279 aa16.23■□□□□ 0.19
AP002360.4-201ENST00000606980 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
AP002360.4-201ENST00000606980 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
AP002360.4-201ENST00000606980 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
AP002360.4-201ENST00000606980 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
AP002360.4-201ENST00000606980 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
AP002360.4-201ENST00000606980 EVX2Q03828 476 aa15.99■□□□□ 0.15
AP002360.4-201ENST00000606980 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
AP002360.4-201ENST00000606980 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
AP002360.4-201ENST00000606980 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
AP002360.4-201ENST00000606980 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
AP002360.4-201ENST00000606980 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
AP002360.4-201ENST00000606980 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
AP002360.4-201ENST00000606980 GABBR2O75899 941 aa15.63■□□□□ 0.09
AP002360.4-201ENST00000606980 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
AP002360.4-201ENST00000606980 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
AP002360.4-201ENST00000606980 LHX8Q68G74 356 aa15.37■□□□□ 0.05
AP002360.4-201ENST00000606980 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
AP002360.4-201ENST00000606980 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
AP002360.4-201ENST00000606980 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
AP002360.4-201ENST00000606980 CLCN6P51797 869 aa15.28■□□□□ 0.04
AP002360.4-201ENST00000606980 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
AP002360.4-201ENST00000606980 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
AP002360.4-201ENST00000606980 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
AP002360.4-201ENST00000606980 ZNF579Q8NAF0 562 aaKnown RBP15.19■□□□□ 0.02
AP002360.4-201ENST00000606980 DCBLD2Q96PD2 775 aa15.17■□□□□ 0.02
AP002360.4-201ENST00000606980 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
AP002360.4-201ENST00000606980 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
AP002360.4-201ENST00000606980 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
AP002360.4-201ENST00000606980 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
AP002360.4-201ENST00000606980 PHF12Q96QT6 1004 aa14.97□□□□□ -0.01
AP002360.4-201ENST00000606980 PROM2Q8N271 834 aa14.81□□□□□ -0.04
AP002360.4-201ENST00000606980 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
AP002360.4-201ENST00000606980 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
AP002360.4-201ENST00000606980 OTUD5Q96G74 571 aa14.77□□□□□ -0.05
AP002360.4-201ENST00000606980 MS4A3Q96HJ5 214 aa14.76□□□□□ -0.05
AP002360.4-201ENST00000606980 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
AP002360.4-201ENST00000606980 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
AP002360.4-201ENST00000606980 ATMINO43313 823 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms