RNA–Protein interactions for RNA: ENST00000606457.1

AC012213.4-201, humanhuman

BASIC

Gene AC012213.4, Length 354 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012213.4-201ENST00000606457 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
AC012213.4-201ENST00000606457 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
AC012213.4-201ENST00000606457 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
AC012213.4-201ENST00000606457 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
AC012213.4-201ENST00000606457 FOXD1Q16676 465 aa24.12■■□□□ 1.45
AC012213.4-201ENST00000606457 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
AC012213.4-201ENST00000606457 PPP6R1Q9UPN7 881 aa22.59■■□□□ 1.21
AC012213.4-201ENST00000606457 ADRA2BP18089 450 aa22.5■■□□□ 1.19
AC012213.4-201ENST00000606457 PIAS4Q8N2W9 510 aaPredicted RBP22.5■■□□□ 1.19
AC012213.4-201ENST00000606457 MSH5O43196 834 aa22.47■■□□□ 1.19
AC012213.4-201ENST00000606457 POTEDQ86YR6 584 aa22.08■■□□□ 1.13
AC012213.4-201ENST00000606457 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
AC012213.4-201ENST00000606457 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
AC012213.4-201ENST00000606457 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
AC012213.4-201ENST00000606457 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
AC012213.4-201ENST00000606457 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
AC012213.4-201ENST00000606457 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
AC012213.4-201ENST00000606457 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
AC012213.4-201ENST00000606457 RNF216Q9NWF9 866 aaPredicted RBP19.53■□□□□ 0.72
AC012213.4-201ENST00000606457 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
AC012213.4-201ENST00000606457 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
AC012213.4-201ENST00000606457 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
AC012213.4-201ENST00000606457 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
AC012213.4-201ENST00000606457 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
AC012213.4-201ENST00000606457 C1QBPQ07021 282 aaKnown RBP18.9■□□□□ 0.62
AC012213.4-201ENST00000606457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
AC012213.4-201ENST00000606457 KCNA4P22459 653 aa18.71■□□□□ 0.59
AC012213.4-201ENST00000606457 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
AC012213.4-201ENST00000606457 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
AC012213.4-201ENST00000606457 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
AC012213.4-201ENST00000606457 CAPN15O75808 1086 aa18.12■□□□□ 0.49
AC012213.4-201ENST00000606457 DSG3P32926 999 aa18.02■□□□□ 0.48
AC012213.4-201ENST00000606457 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
AC012213.4-201ENST00000606457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
AC012213.4-201ENST00000606457 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
AC012213.4-201ENST00000606457 APLP2Q06481 763 aa17.75■□□□□ 0.43
AC012213.4-201ENST00000606457 ABCB7O75027 752 aa17.74■□□□□ 0.43
AC012213.4-201ENST00000606457 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
AC012213.4-201ENST00000606457 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
AC012213.4-201ENST00000606457 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
AC012213.4-201ENST00000606457 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
AC012213.4-201ENST00000606457 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
AC012213.4-201ENST00000606457 POLA2Q14181 598 aa17.36■□□□□ 0.37
AC012213.4-201ENST00000606457 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
AC012213.4-201ENST00000606457 POTEHQ6S545 545 aa17.28■□□□□ 0.36
AC012213.4-201ENST00000606457 ZBTB22O15209 634 aa17.23■□□□□ 0.35
AC012213.4-201ENST00000606457 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
AC012213.4-201ENST00000606457 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
AC012213.4-201ENST00000606457 ATXN8OSP0DMR3 200 aa16.81■□□□□ 0.28
AC012213.4-201ENST00000606457 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
AC012213.4-201ENST00000606457 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
AC012213.4-201ENST00000606457 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
AC012213.4-201ENST00000606457 REM2Q8IYK8 340 aaPredicted RBP16.63■□□□□ 0.25
AC012213.4-201ENST00000606457 FBLN2P98095 1184 aa16.5■□□□□ 0.23
AC012213.4-201ENST00000606457 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
AC012213.4-201ENST00000606457 PITPNM1O00562 1244 aa16.46■□□□□ 0.23
AC012213.4-201ENST00000606457 PIP4P2Q8N4L2 257 aa16.43■□□□□ 0.22
AC012213.4-201ENST00000606457 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
AC012213.4-201ENST00000606457 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
AC012213.4-201ENST00000606457 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
AC012213.4-201ENST00000606457 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
AC012213.4-201ENST00000606457 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
AC012213.4-201ENST00000606457 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
AC012213.4-201ENST00000606457 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
AC012213.4-201ENST00000606457 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
AC012213.4-201ENST00000606457 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
AC012213.4-201ENST00000606457 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
AC012213.4-201ENST00000606457 HAX1O00165 279 aa16.15■□□□□ 0.18
AC012213.4-201ENST00000606457 SPDYE1Q8NFV5 336 aaPredicted RBP16.12■□□□□ 0.17
AC012213.4-201ENST00000606457 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
AC012213.4-201ENST00000606457 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
AC012213.4-201ENST00000606457 EVX2Q03828 476 aa16.02■□□□□ 0.16
AC012213.4-201ENST00000606457 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
AC012213.4-201ENST00000606457 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
AC012213.4-201ENST00000606457 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
AC012213.4-201ENST00000606457 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
AC012213.4-201ENST00000606457 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
AC012213.4-201ENST00000606457 GABBR2O75899 941 aa15.58■□□□□ 0.08
AC012213.4-201ENST00000606457 CD44P16070 742 aaKnown RBP15.51■□□□□ 0.07
AC012213.4-201ENST00000606457 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
AC012213.4-201ENST00000606457 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
AC012213.4-201ENST00000606457 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
AC012213.4-201ENST00000606457 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
AC012213.4-201ENST00000606457 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
AC012213.4-201ENST00000606457 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
AC012213.4-201ENST00000606457 PROM2Q8N271 834 aa15.22■□□□□ 0.03
AC012213.4-201ENST00000606457 LHX8Q68G74 356 aa15.19■□□□□ 0.02
AC012213.4-201ENST00000606457 CLCN6P51797 869 aa15.18■□□□□ 0.02
AC012213.4-201ENST00000606457 GALR2O43603 387 aaPredicted RBP15.13■□□□□ 0.01
AC012213.4-201ENST00000606457 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
AC012213.4-201ENST00000606457 DCBLD2Q96PD2 775 aa15.13■□□□□ 0.01
AC012213.4-201ENST00000606457 PHF12Q96QT6 1004 aa15.12■□□□□ 0.01
AC012213.4-201ENST00000606457 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
AC012213.4-201ENST00000606457 TSPYL2Q9H2G4 693 aaPredicted RBP14.96□□□□□ -0.01
AC012213.4-201ENST00000606457 MIER1Q8N108 512 aa14.95□□□□□ -0.02
AC012213.4-201ENST00000606457 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
AC012213.4-201ENST00000606457 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
AC012213.4-201ENST00000606457 FKBP8Q14318 412 aa14.86□□□□□ -0.03
AC012213.4-201ENST00000606457 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
AC012213.4-201ENST00000606457 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms