RNA–Protein interactions for RNA: ENST00000606197.1

CASC15-204, Transcript of cancer susceptibility 15, humanhuman

TSL 2 BASIC

Gene CASC15, Length 3,969 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC15-204ENST00000606197 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
CASC15-204ENST00000606197 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.16
CASC15-204ENST00000606197 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
CASC15-204ENST00000606197 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
CASC15-204ENST00000606197 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
CASC15-204ENST00000606197 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
CASC15-204ENST00000606197 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
CASC15-204ENST00000606197 TTBK1Q5TCY1 1321 aaPredicted RBP20.49■□□□□ 0.87
CASC15-204ENST00000606197 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
CASC15-204ENST00000606197 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
CASC15-204ENST00000606197 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CASC15-204ENST00000606197 HRCP23327 699 aa20.43■□□□□ 0.86
CASC15-204ENST00000606197 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
CASC15-204ENST00000606197 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
CASC15-204ENST00000606197 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
CASC15-204ENST00000606197 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
CASC15-204ENST00000606197 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
CASC15-204ENST00000606197 YTHDC1Q96MU7 727 aaKnown RBP19.75■□□□□ 0.75
CASC15-204ENST00000606197 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
CASC15-204ENST00000606197 APLP2Q06481 763 aa19.69■□□□□ 0.74
CASC15-204ENST00000606197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
CASC15-204ENST00000606197 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
CASC15-204ENST00000606197 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
CASC15-204ENST00000606197 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
CASC15-204ENST00000606197 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
CASC15-204ENST00000606197 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
CASC15-204ENST00000606197 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
CASC15-204ENST00000606197 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
CASC15-204ENST00000606197 ITGAEP38570 1179 aa19.21■□□□□ 0.67
CASC15-204ENST00000606197 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
CASC15-204ENST00000606197 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
CASC15-204ENST00000606197 ABCC9O60706 1549 aa19.08■□□□□ 0.64
CASC15-204ENST00000606197 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
CASC15-204ENST00000606197 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
CASC15-204ENST00000606197 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
CASC15-204ENST00000606197 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
CASC15-204ENST00000606197 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
CASC15-204ENST00000606197 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
CASC15-204ENST00000606197 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
CASC15-204ENST00000606197 NEFLP07196 543 aa18.75■□□□□ 0.59
CASC15-204ENST00000606197 BCANQ96GW7 911 aa18.75■□□□□ 0.59
CASC15-204ENST00000606197 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
CASC15-204ENST00000606197 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
CASC15-204ENST00000606197 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
CASC15-204ENST00000606197 MYT1Q01538 1121 aa18.62■□□□□ 0.57
CASC15-204ENST00000606197 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
CASC15-204ENST00000606197 MIER1Q8N108 512 aa18.61■□□□□ 0.57
CASC15-204ENST00000606197 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
CASC15-204ENST00000606197 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
CASC15-204ENST00000606197 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
CASC15-204ENST00000606197 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
CASC15-204ENST00000606197 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
CASC15-204ENST00000606197 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
CASC15-204ENST00000606197 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
CASC15-204ENST00000606197 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
CASC15-204ENST00000606197 FKBP8Q14318 412 aa18.26■□□□□ 0.51
CASC15-204ENST00000606197 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
CASC15-204ENST00000606197 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
CASC15-204ENST00000606197 SOGA1O94964 1423 aa18.23■□□□□ 0.51
CASC15-204ENST00000606197 ANP32CO43423 234 aa18.23■□□□□ 0.51
CASC15-204ENST00000606197 CLIP1P30622 1438 aa18.2■□□□□ 0.5
CASC15-204ENST00000606197 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
CASC15-204ENST00000606197 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
CASC15-204ENST00000606197 TNIKQ9UKE5 1360 aa18.1■□□□□ 0.49
CASC15-204ENST00000606197 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
CASC15-204ENST00000606197 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
CASC15-204ENST00000606197 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.49
CASC15-204ENST00000606197 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
CASC15-204ENST00000606197 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
CASC15-204ENST00000606197 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.47
CASC15-204ENST00000606197 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
CASC15-204ENST00000606197 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
CASC15-204ENST00000606197 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
CASC15-204ENST00000606197 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
CASC15-204ENST00000606197 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
CASC15-204ENST00000606197 WIZO95785 1651 aa17.94■□□□□ 0.46
CASC15-204ENST00000606197 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
CASC15-204ENST00000606197 FAM9BQ8IZU0 186 aa17.94■□□□□ 0.46
CASC15-204ENST00000606197 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
CASC15-204ENST00000606197 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
CASC15-204ENST00000606197 EEA1Q15075 1411 aa17.89■□□□□ 0.45
CASC15-204ENST00000606197 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
CASC15-204ENST00000606197 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
CASC15-204ENST00000606197 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
CASC15-204ENST00000606197 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
CASC15-204ENST00000606197 NACADO15069 1562 aa17.83■□□□□ 0.44
CASC15-204ENST00000606197 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
CASC15-204ENST00000606197 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
CASC15-204ENST00000606197 FBLN2P98095 1184 aa17.8■□□□□ 0.44
CASC15-204ENST00000606197 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
CASC15-204ENST00000606197 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
CASC15-204ENST00000606197 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
CASC15-204ENST00000606197 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
CASC15-204ENST00000606197 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
CASC15-204ENST00000606197 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
CASC15-204ENST00000606197 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
CASC15-204ENST00000606197 NBR1Q14596 966 aa17.71■□□□□ 0.42
CASC15-204ENST00000606197 ANP32EQ9BTT0 268 aa17.69■□□□□ 0.42
CASC15-204ENST00000606197 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
CASC15-204ENST00000606197 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms