RNA–Protein interactions for RNA: ENST00000604000.3

LIX1L-201, Transcript of limb and CNS expressed 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIX1L, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIX1L-201ENST00000604000 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
LIX1L-201ENST00000604000 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
LIX1L-201ENST00000604000 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
LIX1L-201ENST00000604000 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
LIX1L-201ENST00000604000 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
LIX1L-201ENST00000604000 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
LIX1L-201ENST00000604000 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
LIX1L-201ENST00000604000 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
LIX1L-201ENST00000604000 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
LIX1L-201ENST00000604000 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
LIX1L-201ENST00000604000 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
LIX1L-201ENST00000604000 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.03
LIX1L-201ENST00000604000 HRCP23327 699 aa21.46■■□□□ 1.03
LIX1L-201ENST00000604000 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
LIX1L-201ENST00000604000 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
LIX1L-201ENST00000604000 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
LIX1L-201ENST00000604000 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
LIX1L-201ENST00000604000 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
LIX1L-201ENST00000604000 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
LIX1L-201ENST00000604000 ZEB1P37275 1124 aaPredicted RBP20.87■□□□□ 0.93
LIX1L-201ENST00000604000 APLP2Q06481 763 aa20.82■□□□□ 0.92
LIX1L-201ENST00000604000 ABCC9O60706 1549 aa20.79■□□□□ 0.92
LIX1L-201ENST00000604000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
LIX1L-201ENST00000604000 YTHDC1Q96MU7 727 aaKnown RBP20.66■□□□□ 0.9
LIX1L-201ENST00000604000 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
LIX1L-201ENST00000604000 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
LIX1L-201ENST00000604000 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
LIX1L-201ENST00000604000 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
LIX1L-201ENST00000604000 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
LIX1L-201ENST00000604000 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
LIX1L-201ENST00000604000 ITGAEP38570 1179 aa20.35■□□□□ 0.85
LIX1L-201ENST00000604000 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
LIX1L-201ENST00000604000 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
LIX1L-201ENST00000604000 RSF1Q96T23 1441 aaPredicted RBP20.24■□□□□ 0.83
LIX1L-201ENST00000604000 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.8
LIX1L-201ENST00000604000 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
LIX1L-201ENST00000604000 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
LIX1L-201ENST00000604000 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
LIX1L-201ENST00000604000 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
LIX1L-201ENST00000604000 ACIN1Q9UKV3 1341 aaKnown RBP19.87■□□□□ 0.77
LIX1L-201ENST00000604000 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
LIX1L-201ENST00000604000 ZNF316A6NFI3 1004 aaPredicted RBP19.85■□□□□ 0.77
LIX1L-201ENST00000604000 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
LIX1L-201ENST00000604000 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
LIX1L-201ENST00000604000 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
LIX1L-201ENST00000604000 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
LIX1L-201ENST00000604000 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
LIX1L-201ENST00000604000 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
LIX1L-201ENST00000604000 SOGA1O94964 1423 aa19.62■□□□□ 0.73
LIX1L-201ENST00000604000 MIER1Q8N108 512 aa19.61■□□□□ 0.73
LIX1L-201ENST00000604000 BCANQ96GW7 911 aa19.61■□□□□ 0.73
LIX1L-201ENST00000604000 NEFLP07196 543 aa19.56■□□□□ 0.72
LIX1L-201ENST00000604000 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
LIX1L-201ENST00000604000 POLR3GLQ9BT43 218 aa19.53■□□□□ 0.72
LIX1L-201ENST00000604000 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
LIX1L-201ENST00000604000 ARID3CA6NKF2 412 aa19.51■□□□□ 0.71
LIX1L-201ENST00000604000 NACADO15069 1562 aa19.48■□□□□ 0.71
LIX1L-201ENST00000604000 CLIP1P30622 1438 aa19.48■□□□□ 0.71
LIX1L-201ENST00000604000 WIZO95785 1651 aa19.48■□□□□ 0.71
LIX1L-201ENST00000604000 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
LIX1L-201ENST00000604000 WRNQ14191 1432 aaPredicted RBP eCLIP19.43■□□□□ 0.7
LIX1L-201ENST00000604000 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
LIX1L-201ENST00000604000 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
LIX1L-201ENST00000604000 TRIM52Q96A61 297 aa19.36■□□□□ 0.69
LIX1L-201ENST00000604000 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
LIX1L-201ENST00000604000 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
LIX1L-201ENST00000604000 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.69
LIX1L-201ENST00000604000 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
LIX1L-201ENST00000604000 EEA1Q15075 1411 aa19.22■□□□□ 0.67
LIX1L-201ENST00000604000 KANK4Q5T7N3 995 aaPredicted RBP19.21■□□□□ 0.67
LIX1L-201ENST00000604000 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
LIX1L-201ENST00000604000 ANP32CO43423 234 aa19.19■□□□□ 0.66
LIX1L-201ENST00000604000 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
LIX1L-201ENST00000604000 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
LIX1L-201ENST00000604000 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
LIX1L-201ENST00000604000 FKBP8Q14318 412 aa19.14■□□□□ 0.65
LIX1L-201ENST00000604000 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.65
LIX1L-201ENST00000604000 FBLN2P98095 1184 aa19.1■□□□□ 0.65
LIX1L-201ENST00000604000 MYT1Q01538 1121 aa19.05■□□□□ 0.64
LIX1L-201ENST00000604000 TOP2AP11388 1531 aaKnown RBP19.02■□□□□ 0.64
LIX1L-201ENST00000604000 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
LIX1L-201ENST00000604000 IRX6P78412 446 aaPredicted RBP19■□□□□ 0.63
LIX1L-201ENST00000604000 ZNF777Q9ULD5 760 aaPredicted RBP19■□□□□ 0.63
LIX1L-201ENST00000604000 RAPGEF2Q9Y4G8 1499 aa19■□□□□ 0.63
LIX1L-201ENST00000604000 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
LIX1L-201ENST00000604000 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
LIX1L-201ENST00000604000 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
LIX1L-201ENST00000604000 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
LIX1L-201ENST00000604000 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
LIX1L-201ENST00000604000 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
LIX1L-201ENST00000604000 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
LIX1L-201ENST00000604000 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
LIX1L-201ENST00000604000 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
LIX1L-201ENST00000604000 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
LIX1L-201ENST00000604000 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
LIX1L-201ENST00000604000 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
LIX1L-201ENST00000604000 SUPT16HQ9Y5B9 1047 aaKnown RBP18.84■□□□□ 0.61
LIX1L-201ENST00000604000 CUX2O14529 1486 aa18.83■□□□□ 0.61
LIX1L-201ENST00000604000 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
LIX1L-201ENST00000604000 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms