RNA–Protein interactions for RNA: ENST00000602683.5

PTP4A2-217, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-217ENST00000602683 AEBP2Q6ZN18 517 aaPredicted RBP35.82■■■■□ 3.32
PTP4A2-217ENST00000602683 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
PTP4A2-217ENST00000602683 SENP3Q9H4L4 574 aaPredicted RBP30.52■■■□□ 2.48
PTP4A2-217ENST00000602683 PHF23Q9BUL5 403 aaPredicted RBP30.12■■■□□ 2.41
PTP4A2-217ENST00000602683 FOXD1Q16676 465 aa28.49■■■□□ 2.15
PTP4A2-217ENST00000602683 PLPPR3Q6T4P5 718 aa26.99■■□□□ 1.91
PTP4A2-217ENST00000602683 MSH5O43196 834 aa26.67■■□□□ 1.86
PTP4A2-217ENST00000602683 PIAS4Q8N2W9 510 aaPredicted RBP26.59■■□□□ 1.85
PTP4A2-217ENST00000602683 PPP6R1Q9UPN7 881 aa26.57■■□□□ 1.84
PTP4A2-217ENST00000602683 ADRA2BP18089 450 aa26.47■■□□□ 1.83
PTP4A2-217ENST00000602683 POTEDQ86YR6 584 aa26.25■■□□□ 1.79
PTP4A2-217ENST00000602683 MAPK8IP2Q13387 824 aaPredicted RBP24.35■■□□□ 1.49
PTP4A2-217ENST00000602683 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
PTP4A2-217ENST00000602683 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
PTP4A2-217ENST00000602683 PPP4R3CPQ6ZMV5 832 aa23.67■■□□□ 1.38
PTP4A2-217ENST00000602683 HOXD11P31277 338 aaPredicted RBP23.27■■□□□ 1.32
PTP4A2-217ENST00000602683 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
PTP4A2-217ENST00000602683 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
PTP4A2-217ENST00000602683 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
PTP4A2-217ENST00000602683 CACNB1Q02641 598 aaPredicted RBP22.95■■□□□ 1.26
PTP4A2-217ENST00000602683 RNF39Q9H2S5 420 aa22.77■■□□□ 1.24
PTP4A2-217ENST00000602683 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
PTP4A2-217ENST00000602683 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
PTP4A2-217ENST00000602683 NPM3O75607 178 aaKnown RBP22.41■■□□□ 1.18
PTP4A2-217ENST00000602683 C1QBPQ07021 282 aaKnown RBP22.4■■□□□ 1.18
PTP4A2-217ENST00000602683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
PTP4A2-217ENST00000602683 KCNA4P22459 653 aa21.91■■□□□ 1.1
PTP4A2-217ENST00000602683 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
PTP4A2-217ENST00000602683 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
PTP4A2-217ENST00000602683 SPINK5Q9NQ38 1064 aaPredicted RBP21.44■■□□□ 1.02
PTP4A2-217ENST00000602683 CAPN15O75808 1086 aa21.37■■□□□ 1.01
PTP4A2-217ENST00000602683 DSG3P32926 999 aa21.29■■□□□ 1
PTP4A2-217ENST00000602683 TRHP20396 242 aaPredicted RBP21.01■□□□□ 0.95
PTP4A2-217ENST00000602683 APLP2Q06481 763 aa21.01■□□□□ 0.95
PTP4A2-217ENST00000602683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
PTP4A2-217ENST00000602683 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
PTP4A2-217ENST00000602683 ZNF219Q9P2Y4 722 aaPredicted RBP20.95■□□□□ 0.94
PTP4A2-217ENST00000602683 ABCB7O75027 752 aa20.89■□□□□ 0.93
PTP4A2-217ENST00000602683 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
PTP4A2-217ENST00000602683 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
PTP4A2-217ENST00000602683 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
PTP4A2-217ENST00000602683 POTEHQ6S545 545 aa20.54■□□□□ 0.88
PTP4A2-217ENST00000602683 FOXD4L1Q9NU39 408 aa20.45■□□□□ 0.86
PTP4A2-217ENST00000602683 POLA2Q14181 598 aa20.41■□□□□ 0.86
PTP4A2-217ENST00000602683 ATF5Q9Y2D1 282 aaPredicted RBP20.29■□□□□ 0.84
PTP4A2-217ENST00000602683 RBM42Q9BTD8 480 aaKnown RBP20.28■□□□□ 0.84
PTP4A2-217ENST00000602683 ZBTB22O15209 634 aa20.16■□□□□ 0.82
PTP4A2-217ENST00000602683 ZBTB12Q9Y330 459 aaPredicted RBP19.96■□□□□ 0.79
PTP4A2-217ENST00000602683 CHRDL2Q6WN34 429 aa19.91■□□□□ 0.78
PTP4A2-217ENST00000602683 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
PTP4A2-217ENST00000602683 AKT1S1Q96B36 256 aa19.8■□□□□ 0.76
PTP4A2-217ENST00000602683 ATXN8OSP0DMR3 200 aa19.79■□□□□ 0.76
PTP4A2-217ENST00000602683 REM2Q8IYK8 340 aaPredicted RBP19.63■□□□□ 0.73
PTP4A2-217ENST00000602683 PITPNM1O00562 1244 aa19.44■□□□□ 0.7
PTP4A2-217ENST00000602683 FBLN2P98095 1184 aa19.43■□□□□ 0.7
PTP4A2-217ENST00000602683 PIP4P2Q8N4L2 257 aa19.42■□□□□ 0.7
PTP4A2-217ENST00000602683 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
PTP4A2-217ENST00000602683 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
PTP4A2-217ENST00000602683 SPDYE2Q495Y8 402 aa19.36■□□□□ 0.69
PTP4A2-217ENST00000602683 MKRN4PQ13434 485 aaPredicted RBP19.35■□□□□ 0.69
PTP4A2-217ENST00000602683 FXR2P51116 673 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTP4A2-217ENST00000602683 SP7Q8TDD2 431 aaPredicted RBP19.2■□□□□ 0.66
PTP4A2-217ENST00000602683 SSUH2Q9Y2M2 353 aa19.12■□□□□ 0.65
PTP4A2-217ENST00000602683 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
PTP4A2-217ENST00000602683 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
PTP4A2-217ENST00000602683 HAX1O00165 279 aa19.07■□□□□ 0.64
PTP4A2-217ENST00000602683 SPDYE1Q8NFV5 336 aaPredicted RBP19.04■□□□□ 0.64
PTP4A2-217ENST00000602683 CLEC11AQ9Y240 323 aa19.03■□□□□ 0.64
PTP4A2-217ENST00000602683 PRKAR2AP13861 404 aaKnown RBP18.92■□□□□ 0.62
PTP4A2-217ENST00000602683 EVX2Q03828 476 aa18.88■□□□□ 0.61
PTP4A2-217ENST00000602683 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTP4A2-217ENST00000602683 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
PTP4A2-217ENST00000602683 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
PTP4A2-217ENST00000602683 PRR29P0C7W0 189 aa18.68■□□□□ 0.58
PTP4A2-217ENST00000602683 C19orf67A6NJJ6 358 aa18.67■□□□□ 0.58
PTP4A2-217ENST00000602683 GABBR2O75899 941 aa18.41■□□□□ 0.54
PTP4A2-217ENST00000602683 FARP1Q9Y4F1 1045 aaPredicted RBP18.4■□□□□ 0.54
PTP4A2-217ENST00000602683 SPDYE4A6NLX3 237 aa18.34■□□□□ 0.53
PTP4A2-217ENST00000602683 CD44P16070 742 aaKnown RBP18.32■□□□□ 0.52
PTP4A2-217ENST00000602683 STAG3Q9UJ98 1225 aa18.25■□□□□ 0.51
PTP4A2-217ENST00000602683 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
PTP4A2-217ENST00000602683 POTEIP0CG38 1075 aa18.05■□□□□ 0.48
PTP4A2-217ENST00000602683 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
PTP4A2-217ENST00000602683 ZRANB1Q9UGI0 708 aa18.04■□□□□ 0.48
PTP4A2-217ENST00000602683 CLCN6P51797 869 aa18.03■□□□□ 0.48
PTP4A2-217ENST00000602683 LHX8Q68G74 356 aa18■□□□□ 0.47
PTP4A2-217ENST00000602683 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
PTP4A2-217ENST00000602683 PROM2Q8N271 834 aa17.9■□□□□ 0.46
PTP4A2-217ENST00000602683 DCBLD2Q96PD2 775 aa17.87■□□□□ 0.45
PTP4A2-217ENST00000602683 GALR2O43603 387 aaPredicted RBP17.84■□□□□ 0.45
PTP4A2-217ENST00000602683 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.44
PTP4A2-217ENST00000602683 NPM1P06748 294 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTP4A2-217ENST00000602683 PHF12Q96QT6 1004 aa17.81■□□□□ 0.44
PTP4A2-217ENST00000602683 MS4A3Q96HJ5 214 aa17.56■□□□□ 0.4
PTP4A2-217ENST00000602683 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
PTP4A2-217ENST00000602683 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
PTP4A2-217ENST00000602683 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
PTP4A2-217ENST00000602683 MIER1Q8N108 512 aa17.49■□□□□ 0.39
PTP4A2-217ENST00000602683 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
PTP4A2-217ENST00000602683 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms