RNA–Protein interactions for RNA: ENST00000601729.1

AC006539.2-201, humanhuman

BASIC

Gene AC006539.2, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.2-201ENST00000601729 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
AC006539.2-201ENST00000601729 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
AC006539.2-201ENST00000601729 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
AC006539.2-201ENST00000601729 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
AC006539.2-201ENST00000601729 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
AC006539.2-201ENST00000601729 FOXD1Q16676 465 aa17.85■□□□□ 0.45
AC006539.2-201ENST00000601729 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
AC006539.2-201ENST00000601729 ADRA2BP18089 450 aa17.12■□□□□ 0.33
AC006539.2-201ENST00000601729 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
AC006539.2-201ENST00000601729 MSH5O43196 834 aa16.54■□□□□ 0.24
AC006539.2-201ENST00000601729 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
AC006539.2-201ENST00000601729 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
AC006539.2-201ENST00000601729 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
AC006539.2-201ENST00000601729 KCNA4P22459 653 aa15.54■□□□□ 0.08
AC006539.2-201ENST00000601729 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
AC006539.2-201ENST00000601729 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
AC006539.2-201ENST00000601729 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
AC006539.2-201ENST00000601729 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
AC006539.2-201ENST00000601729 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
AC006539.2-201ENST00000601729 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
AC006539.2-201ENST00000601729 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
AC006539.2-201ENST00000601729 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
AC006539.2-201ENST00000601729 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
AC006539.2-201ENST00000601729 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
AC006539.2-201ENST00000601729 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
AC006539.2-201ENST00000601729 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
AC006539.2-201ENST00000601729 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
AC006539.2-201ENST00000601729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
AC006539.2-201ENST00000601729 ZBTB22O15209 634 aa14.3□□□□□ -0.12
AC006539.2-201ENST00000601729 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
AC006539.2-201ENST00000601729 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
AC006539.2-201ENST00000601729 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
AC006539.2-201ENST00000601729 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
AC006539.2-201ENST00000601729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
AC006539.2-201ENST00000601729 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
AC006539.2-201ENST00000601729 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
AC006539.2-201ENST00000601729 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
AC006539.2-201ENST00000601729 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
AC006539.2-201ENST00000601729 APLP2Q06481 763 aa13.95□□□□□ -0.18
AC006539.2-201ENST00000601729 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
AC006539.2-201ENST00000601729 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
AC006539.2-201ENST00000601729 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
AC006539.2-201ENST00000601729 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
AC006539.2-201ENST00000601729 CAPN15O75808 1086 aa13.59□□□□□ -0.23
AC006539.2-201ENST00000601729 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
AC006539.2-201ENST00000601729 DSG3P32926 999 aa13.45□□□□□ -0.26
AC006539.2-201ENST00000601729 POLA2Q14181 598 aa13.36□□□□□ -0.27
AC006539.2-201ENST00000601729 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
AC006539.2-201ENST00000601729 ABCB7O75027 752 aa13.28□□□□□ -0.28
AC006539.2-201ENST00000601729 FBLN2P98095 1184 aa13.18□□□□□ -0.3
AC006539.2-201ENST00000601729 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
AC006539.2-201ENST00000601729 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
AC006539.2-201ENST00000601729 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
AC006539.2-201ENST00000601729 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
AC006539.2-201ENST00000601729 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
AC006539.2-201ENST00000601729 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
AC006539.2-201ENST00000601729 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
AC006539.2-201ENST00000601729 FKBP8Q14318 412 aa12.84□□□□□ -0.35
AC006539.2-201ENST00000601729 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
AC006539.2-201ENST00000601729 PROM2Q8N271 834 aa12.81□□□□□ -0.36
AC006539.2-201ENST00000601729 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
AC006539.2-201ENST00000601729 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
AC006539.2-201ENST00000601729 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
AC006539.2-201ENST00000601729 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
AC006539.2-201ENST00000601729 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
AC006539.2-201ENST00000601729 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
AC006539.2-201ENST00000601729 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
AC006539.2-201ENST00000601729 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
AC006539.2-201ENST00000601729 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
AC006539.2-201ENST00000601729 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
AC006539.2-201ENST00000601729 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
AC006539.2-201ENST00000601729 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
AC006539.2-201ENST00000601729 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
AC006539.2-201ENST00000601729 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
AC006539.2-201ENST00000601729 MIER1Q8N108 512 aa12.14□□□□□ -0.47
AC006539.2-201ENST00000601729 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
AC006539.2-201ENST00000601729 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
AC006539.2-201ENST00000601729 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
AC006539.2-201ENST00000601729 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
AC006539.2-201ENST00000601729 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
AC006539.2-201ENST00000601729 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
AC006539.2-201ENST00000601729 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
AC006539.2-201ENST00000601729 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC006539.2-201ENST00000601729 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
AC006539.2-201ENST00000601729 KLHL34Q8N239 644 aa11.97□□□□□ -0.49
AC006539.2-201ENST00000601729 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
AC006539.2-201ENST00000601729 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
AC006539.2-201ENST00000601729 NUBP1P53384 320 aa11.91□□□□□ -0.5
AC006539.2-201ENST00000601729 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
AC006539.2-201ENST00000601729 GSE1Q14687 1217 aa11.82□□□□□ -0.52
AC006539.2-201ENST00000601729 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
AC006539.2-201ENST00000601729 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
AC006539.2-201ENST00000601729 POTEHQ6S545 545 aa11.79□□□□□ -0.52
AC006539.2-201ENST00000601729 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
AC006539.2-201ENST00000601729 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
AC006539.2-201ENST00000601729 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
AC006539.2-201ENST00000601729 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
AC006539.2-201ENST00000601729 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
AC006539.2-201ENST00000601729 PKD2Q13563 968 aa11.72□□□□□ -0.53
AC006539.2-201ENST00000601729 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms