RNA–Protein interactions for RNA: ENST00000601728.1

SNX6P1-201, Transcript of sorting nexin 6 pseudogene 1, humanhuman

BASIC

Gene SNX6P1, Length 1,224 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6P1-201ENST00000601728 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
SNX6P1-201ENST00000601728 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
SNX6P1-201ENST00000601728 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
SNX6P1-201ENST00000601728 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
SNX6P1-201ENST00000601728 FOXD1Q16676 465 aa23.22■■□□□ 1.31
SNX6P1-201ENST00000601728 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
SNX6P1-201ENST00000601728 MSH5O43196 834 aa21.76■■□□□ 1.07
SNX6P1-201ENST00000601728 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
SNX6P1-201ENST00000601728 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
SNX6P1-201ENST00000601728 ADRA2BP18089 450 aa21.63■■□□□ 1.05
SNX6P1-201ENST00000601728 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
SNX6P1-201ENST00000601728 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
SNX6P1-201ENST00000601728 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
SNX6P1-201ENST00000601728 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
SNX6P1-201ENST00000601728 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
SNX6P1-201ENST00000601728 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
SNX6P1-201ENST00000601728 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
SNX6P1-201ENST00000601728 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
SNX6P1-201ENST00000601728 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
SNX6P1-201ENST00000601728 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
SNX6P1-201ENST00000601728 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
SNX6P1-201ENST00000601728 RNF39Q9H2S5 420 aa18.56■□□□□ 0.56
SNX6P1-201ENST00000601728 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
SNX6P1-201ENST00000601728 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
SNX6P1-201ENST00000601728 C1QBPQ07021 282 aaKnown RBP18.3■□□□□ 0.52
SNX6P1-201ENST00000601728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX6P1-201ENST00000601728 KCNA4P22459 653 aa18.02■□□□□ 0.48
SNX6P1-201ENST00000601728 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
SNX6P1-201ENST00000601728 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
SNX6P1-201ENST00000601728 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
SNX6P1-201ENST00000601728 CAPN15O75808 1086 aa17.47■□□□□ 0.39
SNX6P1-201ENST00000601728 DSG3P32926 999 aa17.37■□□□□ 0.37
SNX6P1-201ENST00000601728 APLP2Q06481 763 aa17.27■□□□□ 0.36
SNX6P1-201ENST00000601728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
SNX6P1-201ENST00000601728 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
SNX6P1-201ENST00000601728 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
SNX6P1-201ENST00000601728 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
SNX6P1-201ENST00000601728 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
SNX6P1-201ENST00000601728 ABCB7O75027 752 aa17.05■□□□□ 0.32
SNX6P1-201ENST00000601728 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
SNX6P1-201ENST00000601728 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
SNX6P1-201ENST00000601728 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
SNX6P1-201ENST00000601728 POLA2Q14181 598 aa16.72■□□□□ 0.27
SNX6P1-201ENST00000601728 POTEHQ6S545 545 aa16.66■□□□□ 0.26
SNX6P1-201ENST00000601728 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
SNX6P1-201ENST00000601728 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
SNX6P1-201ENST00000601728 ZBTB22O15209 634 aa16.57■□□□□ 0.24
SNX6P1-201ENST00000601728 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
SNX6P1-201ENST00000601728 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
SNX6P1-201ENST00000601728 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
SNX6P1-201ENST00000601728 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
SNX6P1-201ENST00000601728 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
SNX6P1-201ENST00000601728 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
SNX6P1-201ENST00000601728 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
SNX6P1-201ENST00000601728 FBLN2P98095 1184 aa15.98■□□□□ 0.15
SNX6P1-201ENST00000601728 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
SNX6P1-201ENST00000601728 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
SNX6P1-201ENST00000601728 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
SNX6P1-201ENST00000601728 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
SNX6P1-201ENST00000601728 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
SNX6P1-201ENST00000601728 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
SNX6P1-201ENST00000601728 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
SNX6P1-201ENST00000601728 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNX6P1-201ENST00000601728 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
SNX6P1-201ENST00000601728 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
SNX6P1-201ENST00000601728 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
SNX6P1-201ENST00000601728 SP7Q8TDD2 431 aaPredicted RBP15.61■□□□□ 0.09
SNX6P1-201ENST00000601728 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
SNX6P1-201ENST00000601728 HAX1O00165 279 aa15.55■□□□□ 0.08
SNX6P1-201ENST00000601728 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
SNX6P1-201ENST00000601728 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNX6P1-201ENST00000601728 EVX2Q03828 476 aa15.34■□□□□ 0.05
SNX6P1-201ENST00000601728 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
SNX6P1-201ENST00000601728 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
SNX6P1-201ENST00000601728 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
SNX6P1-201ENST00000601728 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
SNX6P1-201ENST00000601728 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
SNX6P1-201ENST00000601728 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
SNX6P1-201ENST00000601728 GABBR2O75899 941 aa15□□□□□ -0.01
SNX6P1-201ENST00000601728 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
SNX6P1-201ENST00000601728 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
SNX6P1-201ENST00000601728 CLCN6P51797 869 aa14.8□□□□□ -0.04
SNX6P1-201ENST00000601728 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
SNX6P1-201ENST00000601728 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
SNX6P1-201ENST00000601728 PROM2Q8N271 834 aa14.74□□□□□ -0.05
SNX6P1-201ENST00000601728 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
SNX6P1-201ENST00000601728 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
SNX6P1-201ENST00000601728 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX6P1-201ENST00000601728 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
SNX6P1-201ENST00000601728 LHX8Q68G74 356 aa14.64□□□□□ -0.07
SNX6P1-201ENST00000601728 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
SNX6P1-201ENST00000601728 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
SNX6P1-201ENST00000601728 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
SNX6P1-201ENST00000601728 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
SNX6P1-201ENST00000601728 MIER1Q8N108 512 aa14.41□□□□□ -0.1
SNX6P1-201ENST00000601728 TSPYL2Q9H2G4 693 aaPredicted RBP14.4□□□□□ -0.1
SNX6P1-201ENST00000601728 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
SNX6P1-201ENST00000601728 FKBP8Q14318 412 aa14.33□□□□□ -0.12
SNX6P1-201ENST00000601728 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
SNX6P1-201ENST00000601728 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms