RNA–Protein interactions for RNA: ENST00000598288.5

ZNF43-209, Transcript of zinc finger protein 43, humanhuman

TSL 4 BASIC

Gene ZNF43, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-209ENST00000598288 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
ZNF43-209ENST00000598288 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
ZNF43-209ENST00000598288 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
ZNF43-209ENST00000598288 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
ZNF43-209ENST00000598288 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
ZNF43-209ENST00000598288 FOXD1Q16676 465 aa14.38□□□□□ -0.11
ZNF43-209ENST00000598288 ADRA2BP18089 450 aa13.88□□□□□ -0.19
ZNF43-209ENST00000598288 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
ZNF43-209ENST00000598288 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
ZNF43-209ENST00000598288 MSH5O43196 834 aa13.37□□□□□ -0.27
ZNF43-209ENST00000598288 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
ZNF43-209ENST00000598288 NISCHQ9Y2I1 1504 aa12.92□□□□□ -0.34
ZNF43-209ENST00000598288 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
ZNF43-209ENST00000598288 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
ZNF43-209ENST00000598288 KCNA4P22459 653 aa12.63□□□□□ -0.39
ZNF43-209ENST00000598288 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
ZNF43-209ENST00000598288 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
ZNF43-209ENST00000598288 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
ZNF43-209ENST00000598288 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
ZNF43-209ENST00000598288 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
ZNF43-209ENST00000598288 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
ZNF43-209ENST00000598288 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
ZNF43-209ENST00000598288 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
ZNF43-209ENST00000598288 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
ZNF43-209ENST00000598288 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
ZNF43-209ENST00000598288 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
ZNF43-209ENST00000598288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
ZNF43-209ENST00000598288 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
ZNF43-209ENST00000598288 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
ZNF43-209ENST00000598288 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
ZNF43-209ENST00000598288 ZBTB22O15209 634 aa11.55□□□□□ -0.56
ZNF43-209ENST00000598288 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
ZNF43-209ENST00000598288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
ZNF43-209ENST00000598288 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
ZNF43-209ENST00000598288 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
ZNF43-209ENST00000598288 APLP2Q06481 763 aa11.4□□□□□ -0.58
ZNF43-209ENST00000598288 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
ZNF43-209ENST00000598288 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
ZNF43-209ENST00000598288 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
ZNF43-209ENST00000598288 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
ZNF43-209ENST00000598288 CCDC180Q9P1Z9 1646 aa11.3□□□□□ -0.6
ZNF43-209ENST00000598288 CAPN15O75808 1086 aa11.13□□□□□ -0.63
ZNF43-209ENST00000598288 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
ZNF43-209ENST00000598288 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
ZNF43-209ENST00000598288 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
ZNF43-209ENST00000598288 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
ZNF43-209ENST00000598288 ATF5Q9Y2D1 282 aaPredicted RBP11.06□□□□□ -0.64
ZNF43-209ENST00000598288 ZCCHC6Q5VYS8 1495 aaKnown RBP10.97□□□□□ -0.65
ZNF43-209ENST00000598288 POLA2Q14181 598 aa10.89□□□□□ -0.67
ZNF43-209ENST00000598288 ABCB7O75027 752 aa10.85□□□□□ -0.67
ZNF43-209ENST00000598288 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
ZNF43-209ENST00000598288 DSG3P32926 999 aa10.84□□□□□ -0.67
ZNF43-209ENST00000598288 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
ZNF43-209ENST00000598288 FBLN2P98095 1184 aa10.8□□□□□ -0.68
ZNF43-209ENST00000598288 MYO15BQ96JP2 1530 aa10.61□□□□□ -0.71
ZNF43-209ENST00000598288 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
ZNF43-209ENST00000598288 FKBP8Q14318 412 aa10.56□□□□□ -0.72
ZNF43-209ENST00000598288 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
ZNF43-209ENST00000598288 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
ZNF43-209ENST00000598288 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
ZNF43-209ENST00000598288 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
ZNF43-209ENST00000598288 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
ZNF43-209ENST00000598288 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
ZNF43-209ENST00000598288 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
ZNF43-209ENST00000598288 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
ZNF43-209ENST00000598288 ABCC9O60706 1549 aa10.39□□□□□ -0.75
ZNF43-209ENST00000598288 NACADO15069 1562 aa10.35□□□□□ -0.75
ZNF43-209ENST00000598288 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
ZNF43-209ENST00000598288 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
ZNF43-209ENST00000598288 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
ZNF43-209ENST00000598288 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
ZNF43-209ENST00000598288 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
ZNF43-209ENST00000598288 PROM2Q8N271 834 aa10.27□□□□□ -0.77
ZNF43-209ENST00000598288 DCAF8L2P0C7V8 631 aa10.26□□□□□ -0.77
ZNF43-209ENST00000598288 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
ZNF43-209ENST00000598288 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
ZNF43-209ENST00000598288 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
ZNF43-209ENST00000598288 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
ZNF43-209ENST00000598288 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
ZNF43-209ENST00000598288 RSF1Q96T23 1441 aaPredicted RBP10.09□□□□□ -0.79
ZNF43-209ENST00000598288 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
ZNF43-209ENST00000598288 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
ZNF43-209ENST00000598288 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
ZNF43-209ENST00000598288 BAZ1AQ9NRL2 1556 aaPredicted RBP10.04□□□□□ -0.8
ZNF43-209ENST00000598288 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
ZNF43-209ENST00000598288 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
ZNF43-209ENST00000598288 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
ZNF43-209ENST00000598288 MIER1Q8N108 512 aa10□□□□□ -0.81
ZNF43-209ENST00000598288 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
ZNF43-209ENST00000598288 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
ZNF43-209ENST00000598288 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
ZNF43-209ENST00000598288 UNC13AQ9UPW8 1703 aa9.91□□□□□ -0.82
ZNF43-209ENST00000598288 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
ZNF43-209ENST00000598288 TOP2AP11388 1531 aaKnown RBP9.9□□□□□ -0.82
ZNF43-209ENST00000598288 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
ZNF43-209ENST00000598288 WIZO95785 1651 aa9.87□□□□□ -0.83
ZNF43-209ENST00000598288 HRCP23327 699 aa9.87□□□□□ -0.83
ZNF43-209ENST00000598288 EIF4G1Q04637 1599 aaKnown RBP9.86□□□□□ -0.83
ZNF43-209ENST00000598288 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
ZNF43-209ENST00000598288 CECR2Q9BXF3 1484 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms