RNA–Protein interactions for RNA: ENST00000597518.1

LINC00347-205, long intergenic non-protein coding RNA 347, humanhuman

TSL 5 BASIC

Gene LINC00347, Length 868 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-205ENST00000597518 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
LINC00347-205ENST00000597518 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
LINC00347-205ENST00000597518 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
LINC00347-205ENST00000597518 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LINC00347-205ENST00000597518 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
LINC00347-205ENST00000597518 FOXD1Q16676 465 aa16.04■□□□□ 0.16
LINC00347-205ENST00000597518 MSH5O43196 834 aa15.24■□□□□ 0.03
LINC00347-205ENST00000597518 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
LINC00347-205ENST00000597518 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
LINC00347-205ENST00000597518 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
LINC00347-205ENST00000597518 ADRA2BP18089 450 aa14.69□□□□□ -0.06
LINC00347-205ENST00000597518 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
LINC00347-205ENST00000597518 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
LINC00347-205ENST00000597518 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
LINC00347-205ENST00000597518 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
LINC00347-205ENST00000597518 KCNA4P22459 653 aa13.35□□□□□ -0.27
LINC00347-205ENST00000597518 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
LINC00347-205ENST00000597518 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
LINC00347-205ENST00000597518 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
LINC00347-205ENST00000597518 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
LINC00347-205ENST00000597518 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
LINC00347-205ENST00000597518 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
LINC00347-205ENST00000597518 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
LINC00347-205ENST00000597518 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
LINC00347-205ENST00000597518 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
LINC00347-205ENST00000597518 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
LINC00347-205ENST00000597518 POTEHQ6S545 545 aa12.74□□□□□ -0.37
LINC00347-205ENST00000597518 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
LINC00347-205ENST00000597518 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LINC00347-205ENST00000597518 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
LINC00347-205ENST00000597518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00347-205ENST00000597518 ZBTB22O15209 634 aa12.36□□□□□ -0.43
LINC00347-205ENST00000597518 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
LINC00347-205ENST00000597518 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
LINC00347-205ENST00000597518 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
LINC00347-205ENST00000597518 CAPN15O75808 1086 aa12.02□□□□□ -0.49
LINC00347-205ENST00000597518 DSG3P32926 999 aa11.98□□□□□ -0.49
LINC00347-205ENST00000597518 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
LINC00347-205ENST00000597518 APLP2Q06481 763 aa11.9□□□□□ -0.5
LINC00347-205ENST00000597518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
LINC00347-205ENST00000597518 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
LINC00347-205ENST00000597518 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
LINC00347-205ENST00000597518 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
LINC00347-205ENST00000597518 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
LINC00347-205ENST00000597518 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
LINC00347-205ENST00000597518 ABCB7O75027 752 aa11.64□□□□□ -0.55
LINC00347-205ENST00000597518 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
LINC00347-205ENST00000597518 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
LINC00347-205ENST00000597518 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
LINC00347-205ENST00000597518 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
LINC00347-205ENST00000597518 POLA2Q14181 598 aa11.36□□□□□ -0.59
LINC00347-205ENST00000597518 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
LINC00347-205ENST00000597518 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
LINC00347-205ENST00000597518 FKBP8Q14318 412 aa11.2□□□□□ -0.62
LINC00347-205ENST00000597518 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
LINC00347-205ENST00000597518 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
LINC00347-205ENST00000597518 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
LINC00347-205ENST00000597518 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
LINC00347-205ENST00000597518 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
LINC00347-205ENST00000597518 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
LINC00347-205ENST00000597518 HAX1O00165 279 aa10.92□□□□□ -0.66
LINC00347-205ENST00000597518 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
LINC00347-205ENST00000597518 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00347-205ENST00000597518 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
LINC00347-205ENST00000597518 FBLN2P98095 1184 aa10.86□□□□□ -0.67
LINC00347-205ENST00000597518 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
LINC00347-205ENST00000597518 PROM2Q8N271 834 aa10.75□□□□□ -0.69
LINC00347-205ENST00000597518 EVX2Q03828 476 aa10.73□□□□□ -0.69
LINC00347-205ENST00000597518 LHX8Q68G74 356 aa10.73□□□□□ -0.69
LINC00347-205ENST00000597518 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
LINC00347-205ENST00000597518 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
LINC00347-205ENST00000597518 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
LINC00347-205ENST00000597518 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
LINC00347-205ENST00000597518 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
LINC00347-205ENST00000597518 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
LINC00347-205ENST00000597518 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
LINC00347-205ENST00000597518 NISCHQ9Y2I1 1504 aa10.56□□□□□ -0.72
LINC00347-205ENST00000597518 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
LINC00347-205ENST00000597518 VASPP50552 380 aaPredicted RBP10.53□□□□□ -0.72
LINC00347-205ENST00000597518 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC00347-205ENST00000597518 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
LINC00347-205ENST00000597518 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
LINC00347-205ENST00000597518 GABBR2O75899 941 aa10.45□□□□□ -0.74
LINC00347-205ENST00000597518 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
LINC00347-205ENST00000597518 CLCN6P51797 869 aa10.36□□□□□ -0.75
LINC00347-205ENST00000597518 CD44P16070 742 aaKnown RBP10.29□□□□□ -0.76
LINC00347-205ENST00000597518 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
LINC00347-205ENST00000597518 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
LINC00347-205ENST00000597518 PKD2Q13563 968 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 MIER1Q8N108 512 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
LINC00347-205ENST00000597518 POTEMA6NI47 508 aa10.19□□□□□ -0.78
LINC00347-205ENST00000597518 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
LINC00347-205ENST00000597518 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
LINC00347-205ENST00000597518 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms