RNA–Protein interactions for RNA: ENST00000597518.1

LINC00347-205, long intergenic non-protein coding RNA 347, humanhuman

TSL 5 BASIC

Gene LINC00347, Length 868 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-205ENST00000597518 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
LINC00347-205ENST00000597518 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
LINC00347-205ENST00000597518 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
LINC00347-205ENST00000597518 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LINC00347-205ENST00000597518 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
LINC00347-205ENST00000597518 FOXD1Q16676 465 aa16.04■□□□□ 0.16
LINC00347-205ENST00000597518 MSH5O43196 834 aa15.24■□□□□ 0.03
LINC00347-205ENST00000597518 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
LINC00347-205ENST00000597518 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
LINC00347-205ENST00000597518 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
LINC00347-205ENST00000597518 ADRA2BP18089 450 aa14.69□□□□□ -0.06
LINC00347-205ENST00000597518 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
LINC00347-205ENST00000597518 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
LINC00347-205ENST00000597518 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
LINC00347-205ENST00000597518 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
LINC00347-205ENST00000597518 KCNA4P22459 653 aa13.35□□□□□ -0.27
LINC00347-205ENST00000597518 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
LINC00347-205ENST00000597518 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
LINC00347-205ENST00000597518 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
LINC00347-205ENST00000597518 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
LINC00347-205ENST00000597518 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
LINC00347-205ENST00000597518 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
LINC00347-205ENST00000597518 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
LINC00347-205ENST00000597518 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
LINC00347-205ENST00000597518 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
LINC00347-205ENST00000597518 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
LINC00347-205ENST00000597518 POTEHQ6S545 545 aa12.74□□□□□ -0.37
LINC00347-205ENST00000597518 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
LINC00347-205ENST00000597518 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LINC00347-205ENST00000597518 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
LINC00347-205ENST00000597518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00347-205ENST00000597518 ZBTB22O15209 634 aa12.36□□□□□ -0.43
LINC00347-205ENST00000597518 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
LINC00347-205ENST00000597518 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
LINC00347-205ENST00000597518 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
LINC00347-205ENST00000597518 CAPN15O75808 1086 aa12.02□□□□□ -0.49
LINC00347-205ENST00000597518 DSG3P32926 999 aa11.98□□□□□ -0.49
LINC00347-205ENST00000597518 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
LINC00347-205ENST00000597518 APLP2Q06481 763 aa11.9□□□□□ -0.5
LINC00347-205ENST00000597518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
LINC00347-205ENST00000597518 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
LINC00347-205ENST00000597518 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
LINC00347-205ENST00000597518 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
LINC00347-205ENST00000597518 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
LINC00347-205ENST00000597518 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
LINC00347-205ENST00000597518 ABCB7O75027 752 aa11.64□□□□□ -0.55
LINC00347-205ENST00000597518 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
LINC00347-205ENST00000597518 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
LINC00347-205ENST00000597518 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
LINC00347-205ENST00000597518 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
LINC00347-205ENST00000597518 POLA2Q14181 598 aa11.36□□□□□ -0.59
LINC00347-205ENST00000597518 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
LINC00347-205ENST00000597518 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
LINC00347-205ENST00000597518 FKBP8Q14318 412 aa11.2□□□□□ -0.62
LINC00347-205ENST00000597518 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
LINC00347-205ENST00000597518 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
LINC00347-205ENST00000597518 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
LINC00347-205ENST00000597518 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
LINC00347-205ENST00000597518 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
LINC00347-205ENST00000597518 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
LINC00347-205ENST00000597518 HAX1O00165 279 aa10.92□□□□□ -0.66
LINC00347-205ENST00000597518 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
LINC00347-205ENST00000597518 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00347-205ENST00000597518 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
LINC00347-205ENST00000597518 FBLN2P98095 1184 aa10.86□□□□□ -0.67
LINC00347-205ENST00000597518 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
LINC00347-205ENST00000597518 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
LINC00347-205ENST00000597518 PROM2Q8N271 834 aa10.75□□□□□ -0.69
LINC00347-205ENST00000597518 EVX2Q03828 476 aa10.73□□□□□ -0.69
LINC00347-205ENST00000597518 LHX8Q68G74 356 aa10.73□□□□□ -0.69
LINC00347-205ENST00000597518 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
LINC00347-205ENST00000597518 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
LINC00347-205ENST00000597518 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
LINC00347-205ENST00000597518 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
LINC00347-205ENST00000597518 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
LINC00347-205ENST00000597518 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
LINC00347-205ENST00000597518 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
LINC00347-205ENST00000597518 NISCHQ9Y2I1 1504 aa10.56□□□□□ -0.72
LINC00347-205ENST00000597518 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
LINC00347-205ENST00000597518 VASPP50552 380 aaPredicted RBP10.53□□□□□ -0.72
LINC00347-205ENST00000597518 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC00347-205ENST00000597518 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
LINC00347-205ENST00000597518 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
LINC00347-205ENST00000597518 GABBR2O75899 941 aa10.45□□□□□ -0.74
LINC00347-205ENST00000597518 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
LINC00347-205ENST00000597518 CLCN6P51797 869 aa10.36□□□□□ -0.75
LINC00347-205ENST00000597518 CD44P16070 742 aaKnown RBP10.29□□□□□ -0.76
LINC00347-205ENST00000597518 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
LINC00347-205ENST00000597518 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
LINC00347-205ENST00000597518 PKD2Q13563 968 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 MIER1Q8N108 512 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
LINC00347-205ENST00000597518 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
LINC00347-205ENST00000597518 POTEMA6NI47 508 aa10.19□□□□□ -0.78
LINC00347-205ENST00000597518 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
LINC00347-205ENST00000597518 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
LINC00347-205ENST00000597518 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms