RNA–Protein interactions for RNA: ENST00000596743.1

LINC01515-206, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

Gene LINC01515, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-206ENST00000596743 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
LINC01515-206ENST00000596743 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
LINC01515-206ENST00000596743 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
LINC01515-206ENST00000596743 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
LINC01515-206ENST00000596743 FOXD1Q16676 465 aa17.42■□□□□ 0.38
LINC01515-206ENST00000596743 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
LINC01515-206ENST00000596743 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
LINC01515-206ENST00000596743 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
LINC01515-206ENST00000596743 MSH5O43196 834 aa16.26■□□□□ 0.19
LINC01515-206ENST00000596743 ADRA2BP18089 450 aa16.26■□□□□ 0.19
LINC01515-206ENST00000596743 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
LINC01515-206ENST00000596743 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
LINC01515-206ENST00000596743 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
LINC01515-206ENST00000596743 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
LINC01515-206ENST00000596743 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
LINC01515-206ENST00000596743 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
LINC01515-206ENST00000596743 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
LINC01515-206ENST00000596743 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
LINC01515-206ENST00000596743 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
LINC01515-206ENST00000596743 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
LINC01515-206ENST00000596743 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
LINC01515-206ENST00000596743 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
LINC01515-206ENST00000596743 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
LINC01515-206ENST00000596743 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
LINC01515-206ENST00000596743 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
LINC01515-206ENST00000596743 KCNA4P22459 653 aa13.61□□□□□ -0.23
LINC01515-206ENST00000596743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.239e-6■□□□□ 10.7
LINC01515-206ENST00000596743 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
LINC01515-206ENST00000596743 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
LINC01515-206ENST00000596743 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
LINC01515-206ENST00000596743 CAPN15O75808 1086 aa13.1□□□□□ -0.31
LINC01515-206ENST00000596743 DSG3P32926 999 aa13.03□□□□□ -0.32
LINC01515-206ENST00000596743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
LINC01515-206ENST00000596743 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
LINC01515-206ENST00000596743 APLP2Q06481 763 aa12.91□□□□□ -0.34
LINC01515-206ENST00000596743 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
LINC01515-206ENST00000596743 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
LINC01515-206ENST00000596743 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
LINC01515-206ENST00000596743 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
LINC01515-206ENST00000596743 ABCB7O75027 752 aa12.82□□□□□ -0.36
LINC01515-206ENST00000596743 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
LINC01515-206ENST00000596743 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
LINC01515-206ENST00000596743 POLA2Q14181 598 aa12.56□□□□□ -0.4
LINC01515-206ENST00000596743 ZBTB22O15209 634 aa12.53□□□□□ -0.4
LINC01515-206ENST00000596743 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
LINC01515-206ENST00000596743 POTEHQ6S545 545 aa12.43□□□□□ -0.42
LINC01515-206ENST00000596743 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
LINC01515-206ENST00000596743 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
LINC01515-206ENST00000596743 ZBTB12Q9Y330 459 aaPredicted RBP12.27□□□□□ -0.45
LINC01515-206ENST00000596743 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
LINC01515-206ENST00000596743 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
LINC01515-206ENST00000596743 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
LINC01515-206ENST00000596743 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
LINC01515-206ENST00000596743 FBLN2P98095 1184 aa11.99□□□□□ -0.49
LINC01515-206ENST00000596743 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
LINC01515-206ENST00000596743 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
LINC01515-206ENST00000596743 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
LINC01515-206ENST00000596743 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
LINC01515-206ENST00000596743 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
LINC01515-206ENST00000596743 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
LINC01515-206ENST00000596743 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
LINC01515-206ENST00000596743 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
LINC01515-206ENST00000596743 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC01515-206ENST00000596743 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
LINC01515-206ENST00000596743 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
LINC01515-206ENST00000596743 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
LINC01515-206ENST00000596743 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
LINC01515-206ENST00000596743 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
LINC01515-206ENST00000596743 HAX1O00165 279 aa11.63□□□□□ -0.55
LINC01515-206ENST00000596743 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC01515-206ENST00000596743 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
LINC01515-206ENST00000596743 EVX2Q03828 476 aa11.52□□□□□ -0.57
LINC01515-206ENST00000596743 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
LINC01515-206ENST00000596743 CHADLQ6NUI6 762 aa11.49□□□□□ -0.57
LINC01515-206ENST00000596743 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
LINC01515-206ENST00000596743 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
LINC01515-206ENST00000596743 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
LINC01515-206ENST00000596743 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
LINC01515-206ENST00000596743 GABBR2O75899 941 aa11.25□□□□□ -0.61
LINC01515-206ENST00000596743 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
LINC01515-206ENST00000596743 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
LINC01515-206ENST00000596743 PROM2Q8N271 834 aa11.11□□□□□ -0.63
LINC01515-206ENST00000596743 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
LINC01515-206ENST00000596743 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
LINC01515-206ENST00000596743 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
LINC01515-206ENST00000596743 CLCN6P51797 869 aa11.03□□□□□ -0.64
LINC01515-206ENST00000596743 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
LINC01515-206ENST00000596743 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01515-206ENST00000596743 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
LINC01515-206ENST00000596743 LHX8Q68G74 356 aa10.94□□□□□ -0.66
LINC01515-206ENST00000596743 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
LINC01515-206ENST00000596743 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
LINC01515-206ENST00000596743 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
LINC01515-206ENST00000596743 MIER1Q8N108 512 aa10.85□□□□□ -0.67
LINC01515-206ENST00000596743 FKBP8Q14318 412 aa10.84□□□□□ -0.67
LINC01515-206ENST00000596743 TSPYL2Q9H2G4 693 aaPredicted RBP10.83□□□□□ -0.68
LINC01515-206ENST00000596743 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
LINC01515-206ENST00000596743 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
LINC01515-206ENST00000596743 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
LINC01515-206ENST00000596743 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms