RNA–Protein interactions for RNA: ENST00000596338.5

TRPM4-207, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-207ENST00000596338 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
TRPM4-207ENST00000596338 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
TRPM4-207ENST00000596338 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
TRPM4-207ENST00000596338 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
TRPM4-207ENST00000596338 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.61
TRPM4-207ENST00000596338 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
TRPM4-207ENST00000596338 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
TRPM4-207ENST00000596338 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
TRPM4-207ENST00000596338 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
TRPM4-207ENST00000596338 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
TRPM4-207ENST00000596338 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
TRPM4-207ENST00000596338 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
TRPM4-207ENST00000596338 ABCC9O60706 1549 aa24.16■■□□□ 1.46
TRPM4-207ENST00000596338 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
TRPM4-207ENST00000596338 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
TRPM4-207ENST00000596338 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
TRPM4-207ENST00000596338 HRCP23327 699 aa23.89■■□□□ 1.41
TRPM4-207ENST00000596338 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
TRPM4-207ENST00000596338 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
TRPM4-207ENST00000596338 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
TRPM4-207ENST00000596338 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
TRPM4-207ENST00000596338 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
TRPM4-207ENST00000596338 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
TRPM4-207ENST00000596338 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
TRPM4-207ENST00000596338 NACADO15069 1562 aa23.4■■□□□ 1.34
TRPM4-207ENST00000596338 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
TRPM4-207ENST00000596338 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
TRPM4-207ENST00000596338 WIZO95785 1651 aa23.12■■□□□ 1.29
TRPM4-207ENST00000596338 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
TRPM4-207ENST00000596338 RANGAP1P46060 587 aaPredicted RBP23.07■■□□□ 1.28
TRPM4-207ENST00000596338 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
TRPM4-207ENST00000596338 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.27
TRPM4-207ENST00000596338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
TRPM4-207ENST00000596338 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
TRPM4-207ENST00000596338 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
TRPM4-207ENST00000596338 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
TRPM4-207ENST00000596338 APLP2Q06481 763 aa22.74■■□□□ 1.23
TRPM4-207ENST00000596338 SOGA1O94964 1423 aa22.68■■□□□ 1.22
TRPM4-207ENST00000596338 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
TRPM4-207ENST00000596338 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
TRPM4-207ENST00000596338 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
TRPM4-207ENST00000596338 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
TRPM4-207ENST00000596338 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
TRPM4-207ENST00000596338 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
TRPM4-207ENST00000596338 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
TRPM4-207ENST00000596338 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
TRPM4-207ENST00000596338 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
TRPM4-207ENST00000596338 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
TRPM4-207ENST00000596338 EEA1Q15075 1411 aa22.34■■□□□ 1.17
TRPM4-207ENST00000596338 GOLGA3Q08378 1498 aa22.33■■□□□ 1.16
TRPM4-207ENST00000596338 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
TRPM4-207ENST00000596338 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
TRPM4-207ENST00000596338 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
TRPM4-207ENST00000596338 CLIP1P30622 1438 aa22.25■■□□□ 1.15
TRPM4-207ENST00000596338 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
TRPM4-207ENST00000596338 ITGAEP38570 1179 aa22.23■■□□□ 1.15
TRPM4-207ENST00000596338 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
TRPM4-207ENST00000596338 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
TRPM4-207ENST00000596338 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
TRPM4-207ENST00000596338 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
TRPM4-207ENST00000596338 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
TRPM4-207ENST00000596338 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
TRPM4-207ENST00000596338 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
TRPM4-207ENST00000596338 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
TRPM4-207ENST00000596338 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
TRPM4-207ENST00000596338 VPS8Q8N3P4 1428 aa21.94■■□□□ 1.1
TRPM4-207ENST00000596338 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
TRPM4-207ENST00000596338 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
TRPM4-207ENST00000596338 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
TRPM4-207ENST00000596338 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
TRPM4-207ENST00000596338 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
TRPM4-207ENST00000596338 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
TRPM4-207ENST00000596338 FAM50AQ14320 339 aaKnown RBP21.82■■□□□ 1.08
TRPM4-207ENST00000596338 KIF21BO75037 1637 aa21.76■■□□□ 1.07
TRPM4-207ENST00000596338 MIER1Q8N108 512 aa21.75■■□□□ 1.07
TRPM4-207ENST00000596338 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
TRPM4-207ENST00000596338 CUX2O14529 1486 aa21.73■■□□□ 1.07
TRPM4-207ENST00000596338 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
TRPM4-207ENST00000596338 CUX1P39880 1505 aa21.64■■□□□ 1.05
TRPM4-207ENST00000596338 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
TRPM4-207ENST00000596338 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
TRPM4-207ENST00000596338 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
TRPM4-207ENST00000596338 CFTRP13569 1480 aa21.58■■□□□ 1.05
TRPM4-207ENST00000596338 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
TRPM4-207ENST00000596338 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
TRPM4-207ENST00000596338 IGF1RP08069 1367 aa21.53■■□□□ 1.04
TRPM4-207ENST00000596338 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
TRPM4-207ENST00000596338 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
TRPM4-207ENST00000596338 ARID3CA6NKF2 412 aa21.5■■□□□ 1.03
TRPM4-207ENST00000596338 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
TRPM4-207ENST00000596338 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
TRPM4-207ENST00000596338 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
TRPM4-207ENST00000596338 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
TRPM4-207ENST00000596338 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
TRPM4-207ENST00000596338 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
TRPM4-207ENST00000596338 SIN3AQ96ST3 1273 aa21.39■■□□□ 1.02
TRPM4-207ENST00000596338 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
TRPM4-207ENST00000596338 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
TRPM4-207ENST00000596338 CLSPNQ9HAW4 1339 aa21.36■■□□□ 1.01
TRPM4-207ENST00000596338 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms