RNA–Protein interactions for RNA: ENST00000594635.6

ELL-202, Transcript of elongation factor for RNA polymerase II, humanhuman

TSL 1 (best)

Gene ELL, Length 4,074 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-202ENST00000594635 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
ELL-202ENST00000594635 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
ELL-202ENST00000594635 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
ELL-202ENST00000594635 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
ELL-202ENST00000594635 ABCC9O60706 1549 aa23.9■■□□□ 1.42
ELL-202ENST00000594635 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
ELL-202ENST00000594635 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
ELL-202ENST00000594635 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
ELL-202ENST00000594635 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
ELL-202ENST00000594635 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
ELL-202ENST00000594635 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
ELL-202ENST00000594635 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
ELL-202ENST00000594635 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
ELL-202ENST00000594635 LOC105371045A0A1W2PR82 267 aa22.66■■□□□ 1.22
ELL-202ENST00000594635 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
ELL-202ENST00000594635 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
ELL-202ENST00000594635 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
ELL-202ENST00000594635 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
ELL-202ENST00000594635 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
ELL-202ENST00000594635 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
ELL-202ENST00000594635 NACADO15069 1562 aa22.3■■□□□ 1.16
ELL-202ENST00000594635 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
ELL-202ENST00000594635 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
ELL-202ENST00000594635 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
ELL-202ENST00000594635 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
ELL-202ENST00000594635 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
ELL-202ENST00000594635 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
ELL-202ENST00000594635 WIZO95785 1651 aa21.73■■□□□ 1.07
ELL-202ENST00000594635 APLP2Q06481 763 aa21.69■■□□□ 1.06
ELL-202ENST00000594635 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
ELL-202ENST00000594635 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
ELL-202ENST00000594635 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
ELL-202ENST00000594635 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
ELL-202ENST00000594635 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
ELL-202ENST00000594635 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
ELL-202ENST00000594635 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
ELL-202ENST00000594635 P3H3Q8IVL6 736 aa21.35■■□□□ 1.01
ELL-202ENST00000594635 ITGAEP38570 1179 aa21.33■■□□□ 1
ELL-202ENST00000594635 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
ELL-202ENST00000594635 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
ELL-202ENST00000594635 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
ELL-202ENST00000594635 SOGA1O94964 1423 aa21.27■■□□□ 1
ELL-202ENST00000594635 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
ELL-202ENST00000594635 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
ELL-202ENST00000594635 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
ELL-202ENST00000594635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
ELL-202ENST00000594635 FBLN2P98095 1184 aa21.2■□□□□ 0.98
ELL-202ENST00000594635 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
ELL-202ENST00000594635 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
ELL-202ENST00000594635 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
ELL-202ENST00000594635 HRCP23327 699 aa21.11■□□□□ 0.97
ELL-202ENST00000594635 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
ELL-202ENST00000594635 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
ELL-202ENST00000594635 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.95
ELL-202ENST00000594635 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
ELL-202ENST00000594635 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
ELL-202ENST00000594635 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
ELL-202ENST00000594635 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
ELL-202ENST00000594635 CLIP1P30622 1438 aa20.79■□□□□ 0.92
ELL-202ENST00000594635 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
ELL-202ENST00000594635 NESP48681 1621 aa20.77■□□□□ 0.92
ELL-202ENST00000594635 CUX2O14529 1486 aa20.77■□□□□ 0.92
ELL-202ENST00000594635 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
ELL-202ENST00000594635 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
ELL-202ENST00000594635 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
ELL-202ENST00000594635 TNIKQ9UKE5 1360 aa20.7■□□□□ 0.9
ELL-202ENST00000594635 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
ELL-202ENST00000594635 EEA1Q15075 1411 aa20.66■□□□□ 0.9
ELL-202ENST00000594635 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
ELL-202ENST00000594635 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
ELL-202ENST00000594635 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
ELL-202ENST00000594635 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
ELL-202ENST00000594635 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
ELL-202ENST00000594635 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
ELL-202ENST00000594635 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
ELL-202ENST00000594635 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
ELL-202ENST00000594635 KANK4Q5T7N3 995 aaPredicted RBP20.54■□□□□ 0.88
ELL-202ENST00000594635 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
ELL-202ENST00000594635 CFTRP13569 1480 aa20.51■□□□□ 0.87
ELL-202ENST00000594635 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
ELL-202ENST00000594635 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
ELL-202ENST00000594635 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
ELL-202ENST00000594635 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
ELL-202ENST00000594635 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
ELL-202ENST00000594635 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
ELL-202ENST00000594635 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
ELL-202ENST00000594635 YTHDC1Q96MU7 727 aaKnown RBP20.41■□□□□ 0.86
ELL-202ENST00000594635 CUX1P39880 1505 aa20.41■□□□□ 0.86
ELL-202ENST00000594635 IGF1RP08069 1367 aa20.4■□□□□ 0.86
ELL-202ENST00000594635 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
ELL-202ENST00000594635 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.841e-6■■■■■ 28.1
ELL-202ENST00000594635 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
ELL-202ENST00000594635 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
ELL-202ENST00000594635 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
ELL-202ENST00000594635 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
ELL-202ENST00000594635 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
ELL-202ENST00000594635 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
ELL-202ENST00000594635 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
ELL-202ENST00000594635 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
ELL-202ENST00000594635 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms