RNA–Protein interactions for RNA: ENST00000593056.1

LINC01533-205, Transcript of long intergenic non-protein coding RNA 1533, humanhuman

TSL 3 BASIC

Gene LINC01533, Length 607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01533-205ENST00000593056 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
LINC01533-205ENST00000593056 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
LINC01533-205ENST00000593056 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
LINC01533-205ENST00000593056 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
LINC01533-205ENST00000593056 FOXD1Q16676 465 aa13.34□□□□□ -0.27
LINC01533-205ENST00000593056 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
LINC01533-205ENST00000593056 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
LINC01533-205ENST00000593056 ADRA2BP18089 450 aa12.45□□□□□ -0.42
LINC01533-205ENST00000593056 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
LINC01533-205ENST00000593056 MSH5O43196 834 aa12.31□□□□□ -0.44
LINC01533-205ENST00000593056 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
LINC01533-205ENST00000593056 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
LINC01533-205ENST00000593056 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
LINC01533-205ENST00000593056 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
LINC01533-205ENST00000593056 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
LINC01533-205ENST00000593056 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
LINC01533-205ENST00000593056 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
LINC01533-205ENST00000593056 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
LINC01533-205ENST00000593056 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
LINC01533-205ENST00000593056 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
LINC01533-205ENST00000593056 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
LINC01533-205ENST00000593056 NPM3O75607 178 aaKnown RBP10.54□□□□□ -0.72
LINC01533-205ENST00000593056 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
LINC01533-205ENST00000593056 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
LINC01533-205ENST00000593056 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
LINC01533-205ENST00000593056 KCNA4P22459 653 aa10.35□□□□□ -0.75
LINC01533-205ENST00000593056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC01533-205ENST00000593056 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
LINC01533-205ENST00000593056 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
LINC01533-205ENST00000593056 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
LINC01533-205ENST00000593056 DSG3P32926 999 aa9.95□□□□□ -0.82
LINC01533-205ENST00000593056 CAPN15O75808 1086 aa9.92□□□□□ -0.82
LINC01533-205ENST00000593056 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
LINC01533-205ENST00000593056 ABCB7O75027 752 aa9.78□□□□□ -0.84
LINC01533-205ENST00000593056 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
LINC01533-205ENST00000593056 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
LINC01533-205ENST00000593056 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.86
LINC01533-205ENST00000593056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.64□□□□□ -0.87
LINC01533-205ENST00000593056 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
LINC01533-205ENST00000593056 HNRNPUL2Q1KMD3 747 aaKnown RBP9.64□□□□□ -0.87
LINC01533-205ENST00000593056 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
LINC01533-205ENST00000593056 ZBTB22O15209 634 aa9.6□□□□□ -0.87
LINC01533-205ENST00000593056 APLP2Q06481 763 aa9.6□□□□□ -0.87
LINC01533-205ENST00000593056 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
LINC01533-205ENST00000593056 POLA2Q14181 598 aa9.53□□□□□ -0.88
LINC01533-205ENST00000593056 POTEHQ6S545 545 aa9.52□□□□□ -0.89
LINC01533-205ENST00000593056 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
LINC01533-205ENST00000593056 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
LINC01533-205ENST00000593056 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
LINC01533-205ENST00000593056 ATXN8OSP0DMR3 200 aa9.2□□□□□ -0.94
LINC01533-205ENST00000593056 AKT1S1Q96B36 256 aa9.17□□□□□ -0.94
LINC01533-205ENST00000593056 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
LINC01533-205ENST00000593056 REM2Q8IYK8 340 aaPredicted RBP9.16□□□□□ -0.94
LINC01533-205ENST00000593056 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
LINC01533-205ENST00000593056 PITPNM1O00562 1244 aa9.08□□□□□ -0.96
LINC01533-205ENST00000593056 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
LINC01533-205ENST00000593056 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
LINC01533-205ENST00000593056 FXR2P51116 673 aaKnown RBP eCLIP9□□□□□ -0.97
LINC01533-205ENST00000593056 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
LINC01533-205ENST00000593056 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
LINC01533-205ENST00000593056 FBLN2P98095 1184 aa8.98□□□□□ -0.97
LINC01533-205ENST00000593056 SPDYE2Q495Y8 402 aa8.98□□□□□ -0.97
LINC01533-205ENST00000593056 SSUH2Q9Y2M2 353 aa8.94□□□□□ -0.98
LINC01533-205ENST00000593056 EVX2Q03828 476 aa8.92□□□□□ -0.98
LINC01533-205ENST00000593056 SP7Q8TDD2 431 aaPredicted RBP8.89□□□□□ -0.99
LINC01533-205ENST00000593056 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
LINC01533-205ENST00000593056 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
LINC01533-205ENST00000593056 CLEC11AQ9Y240 323 aa8.84□□□□□ -0.99
LINC01533-205ENST00000593056 HAX1O00165 279 aa8.82□□□□□ -1
LINC01533-205ENST00000593056 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
LINC01533-205ENST00000593056 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
LINC01533-205ENST00000593056 SPDYE1Q8NFV5 336 aaPredicted RBP8.8□□□□□ -1
LINC01533-205ENST00000593056 CHADLQ6NUI6 762 aa8.78□□□□□ -1
LINC01533-205ENST00000593056 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
LINC01533-205ENST00000593056 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
LINC01533-205ENST00000593056 GABBR2O75899 941 aa8.59□□□□□ -1.03
LINC01533-205ENST00000593056 SPDYE4A6NLX3 237 aa8.57□□□□□ -1.04
LINC01533-205ENST00000593056 FARP1Q9Y4F1 1045 aaPredicted RBP8.57□□□□□ -1.04
LINC01533-205ENST00000593056 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
LINC01533-205ENST00000593056 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
LINC01533-205ENST00000593056 CD44P16070 742 aaKnown RBP8.51□□□□□ -1.05
LINC01533-205ENST00000593056 MNX1P50219 401 aaPredicted RBP8.45□□□□□ -1.06
LINC01533-205ENST00000593056 PROM2Q8N271 834 aa8.44□□□□□ -1.06
LINC01533-205ENST00000593056 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
LINC01533-205ENST00000593056 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
LINC01533-205ENST00000593056 ZNF579Q8NAF0 562 aaKnown RBP8.38□□□□□ -1.07
LINC01533-205ENST00000593056 GALR2O43603 387 aaPredicted RBP8.36□□□□□ -1.07
LINC01533-205ENST00000593056 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
LINC01533-205ENST00000593056 LHX8Q68G74 356 aa8.34□□□□□ -1.07
LINC01533-205ENST00000593056 PELP1Q8IZL8 1130 aaKnown RBP8.26□□□□□ -1.09
LINC01533-205ENST00000593056 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
LINC01533-205ENST00000593056 CLCN6P51797 869 aa8.23□□□□□ -1.09
LINC01533-205ENST00000593056 DCBLD2Q96PD2 775 aa8.23□□□□□ -1.09
LINC01533-205ENST00000593056 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC01533-205ENST00000593056 MS4A3Q96HJ5 214 aa8.22□□□□□ -1.09
LINC01533-205ENST00000593056 TSPYL2Q9H2G4 693 aaPredicted RBP8.2□□□□□ -1.1
LINC01533-205ENST00000593056 CCDC61Q9Y6R9 512 aa8.19□□□□□ -1.1
LINC01533-205ENST00000593056 RASEFQ8IZ41 740 aa8.18□□□□□ -1.1
LINC01533-205ENST00000593056 TRPC6Q9Y210 931 aa8.18□□□□□ -1.1
LINC01533-205ENST00000593056 PAK3O75914 559 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms