RNA–Protein interactions for RNA: ENST00000593039.5

AC004223.3-201, humanhuman

APPRIS P5 TSL 2 BASIC

Gene AC004223.3, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004223.3-201ENST00000593039 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
AC004223.3-201ENST00000593039 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
AC004223.3-201ENST00000593039 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
AC004223.3-201ENST00000593039 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.92
AC004223.3-201ENST00000593039 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.9
AC004223.3-201ENST00000593039 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
AC004223.3-201ENST00000593039 SUPT5HO00267 1087 aaKnown RBP26.43■■□□□ 1.82
AC004223.3-201ENST00000593039 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
AC004223.3-201ENST00000593039 NACADO15069 1562 aa25.92■■□□□ 1.74
AC004223.3-201ENST00000593039 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
AC004223.3-201ENST00000593039 ABCC9O60706 1549 aa25.79■■□□□ 1.72
AC004223.3-201ENST00000593039 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
AC004223.3-201ENST00000593039 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
AC004223.3-201ENST00000593039 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
AC004223.3-201ENST00000593039 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
AC004223.3-201ENST00000593039 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
AC004223.3-201ENST00000593039 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
AC004223.3-201ENST00000593039 WIZO95785 1651 aa24.9■■□□□ 1.58
AC004223.3-201ENST00000593039 UNC13AQ9UPW8 1703 aa24.87■■□□□ 1.57
AC004223.3-201ENST00000593039 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
AC004223.3-201ENST00000593039 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
AC004223.3-201ENST00000593039 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
AC004223.3-201ENST00000593039 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
AC004223.3-201ENST00000593039 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
AC004223.3-201ENST00000593039 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
AC004223.3-201ENST00000593039 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
AC004223.3-201ENST00000593039 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
AC004223.3-201ENST00000593039 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
AC004223.3-201ENST00000593039 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
AC004223.3-201ENST00000593039 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
AC004223.3-201ENST00000593039 FAM9AQ8IZU1 332 aaPredicted RBP24.35■■□□□ 1.49
AC004223.3-201ENST00000593039 HRCP23327 699 aa24.33■■□□□ 1.49
AC004223.3-201ENST00000593039 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
AC004223.3-201ENST00000593039 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
AC004223.3-201ENST00000593039 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
AC004223.3-201ENST00000593039 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
AC004223.3-201ENST00000593039 EEA1Q15075 1411 aa24.14■■□□□ 1.45
AC004223.3-201ENST00000593039 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.435e-11■■■■■ 40
AC004223.3-201ENST00000593039 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
AC004223.3-201ENST00000593039 HMGXB3Q12766 1538 aa23.93■■□□□ 1.42
AC004223.3-201ENST00000593039 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
AC004223.3-201ENST00000593039 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
AC004223.3-201ENST00000593039 SOGA1O94964 1423 aa23.89■■□□□ 1.41
AC004223.3-201ENST00000593039 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
AC004223.3-201ENST00000593039 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
AC004223.3-201ENST00000593039 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
AC004223.3-201ENST00000593039 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
AC004223.3-201ENST00000593039 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
AC004223.3-201ENST00000593039 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
AC004223.3-201ENST00000593039 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
AC004223.3-201ENST00000593039 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
AC004223.3-201ENST00000593039 KIF21BO75037 1637 aa23.68■■□□□ 1.38
AC004223.3-201ENST00000593039 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
AC004223.3-201ENST00000593039 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
AC004223.3-201ENST00000593039 CFTRP13569 1480 aa23.58■■□□□ 1.36
AC004223.3-201ENST00000593039 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
AC004223.3-201ENST00000593039 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
AC004223.3-201ENST00000593039 CLIP1P30622 1438 aa23.42■■□□□ 1.34
AC004223.3-201ENST00000593039 CUX1P39880 1505 aa23.42■■□□□ 1.34
AC004223.3-201ENST00000593039 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
AC004223.3-201ENST00000593039 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
AC004223.3-201ENST00000593039 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
AC004223.3-201ENST00000593039 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
AC004223.3-201ENST00000593039 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
AC004223.3-201ENST00000593039 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.33
AC004223.3-201ENST00000593039 VPS8Q8N3P4 1428 aa23.32■■□□□ 1.32
AC004223.3-201ENST00000593039 APLP2Q06481 763 aa23.26■■□□□ 1.31
AC004223.3-201ENST00000593039 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
AC004223.3-201ENST00000593039 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
AC004223.3-201ENST00000593039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
AC004223.3-201ENST00000593039 CUX2O14529 1486 aa23.1■■□□□ 1.29
AC004223.3-201ENST00000593039 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
AC004223.3-201ENST00000593039 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
AC004223.3-201ENST00000593039 IGF1RP08069 1367 aa23.04■■□□□ 1.28
AC004223.3-201ENST00000593039 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
AC004223.3-201ENST00000593039 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
AC004223.3-201ENST00000593039 RANGAP1P46060 587 aaPredicted RBP23■■□□□ 1.27
AC004223.3-201ENST00000593039 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
AC004223.3-201ENST00000593039 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
AC004223.3-201ENST00000593039 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
AC004223.3-201ENST00000593039 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
AC004223.3-201ENST00000593039 ARHGAP35Q9NRY4 1499 aa22.9■■□□□ 1.26
AC004223.3-201ENST00000593039 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
AC004223.3-201ENST00000593039 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
AC004223.3-201ENST00000593039 NESP48681 1621 aa22.83■■□□□ 1.25
AC004223.3-201ENST00000593039 HNRNPUL2Q1KMD3 747 aaKnown RBP22.83■■□□□ 1.25
AC004223.3-201ENST00000593039 MAP3K1Q13233 1512 aa22.8■■□□□ 1.24
AC004223.3-201ENST00000593039 CUL7Q14999 1698 aa22.8■■□□□ 1.24
AC004223.3-201ENST00000593039 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
AC004223.3-201ENST00000593039 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
AC004223.3-201ENST00000593039 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
AC004223.3-201ENST00000593039 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
AC004223.3-201ENST00000593039 KANK4Q5T7N3 995 aaPredicted RBP22.71■■□□□ 1.23
AC004223.3-201ENST00000593039 EFCAB5A4FU69 1503 aa22.7■■□□□ 1.22
AC004223.3-201ENST00000593039 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
AC004223.3-201ENST00000593039 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
AC004223.3-201ENST00000593039 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
AC004223.3-201ENST00000593039 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
AC004223.3-201ENST00000593039 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
AC004223.3-201ENST00000593039 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms