RNA–Protein interactions for RNA: ENST00000590996.5

NBR1-206, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-206ENST00000590996 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
NBR1-206ENST00000590996 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
NBR1-206ENST00000590996 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
NBR1-206ENST00000590996 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
NBR1-206ENST00000590996 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
NBR1-206ENST00000590996 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
NBR1-206ENST00000590996 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
NBR1-206ENST00000590996 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
NBR1-206ENST00000590996 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
NBR1-206ENST00000590996 LOC105371045A0A1W2PR82 267 aa17.58■□□□□ 0.4
NBR1-206ENST00000590996 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
NBR1-206ENST00000590996 HRCP23327 699 aa17.52■□□□□ 0.4
NBR1-206ENST00000590996 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
NBR1-206ENST00000590996 ABCC9O60706 1549 aa17.5■□□□□ 0.39
NBR1-206ENST00000590996 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
NBR1-206ENST00000590996 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.35
NBR1-206ENST00000590996 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
NBR1-206ENST00000590996 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
NBR1-206ENST00000590996 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
NBR1-206ENST00000590996 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
NBR1-206ENST00000590996 NACADO15069 1562 aa17.17■□□□□ 0.34
NBR1-206ENST00000590996 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
NBR1-206ENST00000590996 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
NBR1-206ENST00000590996 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
NBR1-206ENST00000590996 WIZO95785 1651 aa17.02■□□□□ 0.32
NBR1-206ENST00000590996 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
NBR1-206ENST00000590996 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
NBR1-206ENST00000590996 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
NBR1-206ENST00000590996 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
NBR1-206ENST00000590996 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
NBR1-206ENST00000590996 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
NBR1-206ENST00000590996 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
NBR1-206ENST00000590996 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
NBR1-206ENST00000590996 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
NBR1-206ENST00000590996 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
NBR1-206ENST00000590996 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
NBR1-206ENST00000590996 SOGA1O94964 1423 aa16.57■□□□□ 0.24
NBR1-206ENST00000590996 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
NBR1-206ENST00000590996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
NBR1-206ENST00000590996 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
NBR1-206ENST00000590996 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
NBR1-206ENST00000590996 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
NBR1-206ENST00000590996 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
NBR1-206ENST00000590996 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
NBR1-206ENST00000590996 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
NBR1-206ENST00000590996 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
NBR1-206ENST00000590996 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
NBR1-206ENST00000590996 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
NBR1-206ENST00000590996 EEA1Q15075 1411 aa16.35■□□□□ 0.21
NBR1-206ENST00000590996 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
NBR1-206ENST00000590996 MYT1Q01538 1121 aa16.31■□□□□ 0.2
NBR1-206ENST00000590996 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
NBR1-206ENST00000590996 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
NBR1-206ENST00000590996 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
NBR1-206ENST00000590996 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
NBR1-206ENST00000590996 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
NBR1-206ENST00000590996 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
NBR1-206ENST00000590996 CLIP1P30622 1438 aa16.14■□□□□ 0.17
NBR1-206ENST00000590996 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
NBR1-206ENST00000590996 KIF21BO75037 1637 aa16.13■□□□□ 0.17
NBR1-206ENST00000590996 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
NBR1-206ENST00000590996 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
NBR1-206ENST00000590996 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
NBR1-206ENST00000590996 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
NBR1-206ENST00000590996 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
NBR1-206ENST00000590996 APLP2Q06481 763 aa16.01■□□□□ 0.15
NBR1-206ENST00000590996 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
NBR1-206ENST00000590996 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
NBR1-206ENST00000590996 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
NBR1-206ENST00000590996 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
NBR1-206ENST00000590996 PRXQ9BXM0 1461 aa15.93■□□□□ 0.14
NBR1-206ENST00000590996 CUX1P39880 1505 aa15.92■□□□□ 0.14
NBR1-206ENST00000590996 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
NBR1-206ENST00000590996 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
NBR1-206ENST00000590996 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
NBR1-206ENST00000590996 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
NBR1-206ENST00000590996 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
NBR1-206ENST00000590996 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
NBR1-206ENST00000590996 CFTRP13569 1480 aa15.84■□□□□ 0.13
NBR1-206ENST00000590996 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
NBR1-206ENST00000590996 MIER1Q8N108 512 aa15.82■□□□□ 0.12
NBR1-206ENST00000590996 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
NBR1-206ENST00000590996 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
NBR1-206ENST00000590996 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
NBR1-206ENST00000590996 IGF1RP08069 1367 aa15.72■□□□□ 0.11
NBR1-206ENST00000590996 CUX2O14529 1486 aa15.71■□□□□ 0.11
NBR1-206ENST00000590996 ITGAEP38570 1179 aa15.7■□□□□ 0.1
NBR1-206ENST00000590996 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
NBR1-206ENST00000590996 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
NBR1-206ENST00000590996 CCNB3Q8WWL7 1395 aa15.65■□□□□ 0.1
NBR1-206ENST00000590996 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
NBR1-206ENST00000590996 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
NBR1-206ENST00000590996 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
NBR1-206ENST00000590996 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
NBR1-206ENST00000590996 PRDM2Q13029 1718 aa15.58■□□□□ 0.09
NBR1-206ENST00000590996 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
NBR1-206ENST00000590996 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
NBR1-206ENST00000590996 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
NBR1-206ENST00000590996 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
NBR1-206ENST00000590996 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms