RNA–Protein interactions for RNA: ENST00000590850.1

AC040904.1-201, humanhuman

BASIC

Gene AC040904.1, Length 223 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040904.1-201ENST00000590850 AEBP2Q6ZN18 517 aaPredicted RBP34.03■■■■□ 3.04
AC040904.1-201ENST00000590850 CHIC1Q5VXU3 224 aa32.35■■■□□ 2.77
AC040904.1-201ENST00000590850 SENP3Q9H4L4 574 aaPredicted RBP29.15■■■□□ 2.26
AC040904.1-201ENST00000590850 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
AC040904.1-201ENST00000590850 FOXD1Q16676 465 aa27.1■■□□□ 1.93
AC040904.1-201ENST00000590850 PLPPR3Q6T4P5 718 aa25.9■■□□□ 1.74
AC040904.1-201ENST00000590850 MSH5O43196 834 aa25.46■■□□□ 1.67
AC040904.1-201ENST00000590850 PIAS4Q8N2W9 510 aaPredicted RBP25.39■■□□□ 1.66
AC040904.1-201ENST00000590850 PPP6R1Q9UPN7 881 aa25.29■■□□□ 1.64
AC040904.1-201ENST00000590850 ADRA2BP18089 450 aa25.25■■□□□ 1.63
AC040904.1-201ENST00000590850 POTEDQ86YR6 584 aa24.82■■□□□ 1.56
AC040904.1-201ENST00000590850 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
AC040904.1-201ENST00000590850 MAPK8IP2Q13387 824 aaPredicted RBP23.19■■□□□ 1.3
AC040904.1-201ENST00000590850 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
AC040904.1-201ENST00000590850 PPP4R3CPQ6ZMV5 832 aa22.68■■□□□ 1.22
AC040904.1-201ENST00000590850 CNKSR2Q8WXI2 1034 aa22.27■■□□□ 1.16
AC040904.1-201ENST00000590850 DCAF8L1A6NGE4 600 aa22.24■■□□□ 1.15
AC040904.1-201ENST00000590850 HOXD11P31277 338 aaPredicted RBP22.2■■□□□ 1.14
AC040904.1-201ENST00000590850 RNF216Q9NWF9 866 aaPredicted RBP22.06■■□□□ 1.12
AC040904.1-201ENST00000590850 CACNB1Q02641 598 aaPredicted RBP21.88■■□□□ 1.09
AC040904.1-201ENST00000590850 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
AC040904.1-201ENST00000590850 RNF39Q9H2S5 420 aa21.66■■□□□ 1.06
AC040904.1-201ENST00000590850 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
AC040904.1-201ENST00000590850 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
AC040904.1-201ENST00000590850 C1QBPQ07021 282 aaKnown RBP21.39■■□□□ 1.01
AC040904.1-201ENST00000590850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.99
AC040904.1-201ENST00000590850 KCNA4P22459 653 aa21.02■□□□□ 0.96
AC040904.1-201ENST00000590850 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
AC040904.1-201ENST00000590850 CAPN15O75808 1086 aa20.48■□□□□ 0.87
AC040904.1-201ENST00000590850 SLC4A2P04920 1241 aa20.46■□□□□ 0.87
AC040904.1-201ENST00000590850 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
AC040904.1-201ENST00000590850 APLP2Q06481 763 aa20.28■□□□□ 0.84
AC040904.1-201ENST00000590850 DSG3P32926 999 aa20.27■□□□□ 0.84
AC040904.1-201ENST00000590850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
AC040904.1-201ENST00000590850 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
AC040904.1-201ENST00000590850 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
AC040904.1-201ENST00000590850 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
AC040904.1-201ENST00000590850 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
AC040904.1-201ENST00000590850 ABCB7O75027 752 aa19.97■□□□□ 0.79
AC040904.1-201ENST00000590850 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
AC040904.1-201ENST00000590850 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
AC040904.1-201ENST00000590850 FOXD4L1Q9NU39 408 aa19.67■□□□□ 0.74
AC040904.1-201ENST00000590850 POLA2Q14181 598 aa19.57■□□□□ 0.72
AC040904.1-201ENST00000590850 POTEHQ6S545 545 aa19.48■□□□□ 0.71
AC040904.1-201ENST00000590850 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
AC040904.1-201ENST00000590850 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
AC040904.1-201ENST00000590850 ZBTB22O15209 634 aa19.27■□□□□ 0.68
AC040904.1-201ENST00000590850 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
AC040904.1-201ENST00000590850 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
AC040904.1-201ENST00000590850 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
AC040904.1-201ENST00000590850 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
AC040904.1-201ENST00000590850 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
AC040904.1-201ENST00000590850 FBLN2P98095 1184 aa18.75■□□□□ 0.59
AC040904.1-201ENST00000590850 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
AC040904.1-201ENST00000590850 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
AC040904.1-201ENST00000590850 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
AC040904.1-201ENST00000590850 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
AC040904.1-201ENST00000590850 PITPNM1O00562 1244 aa18.54■□□□□ 0.56
AC040904.1-201ENST00000590850 PIP4P2Q8N4L2 257 aa18.49■□□□□ 0.55
AC040904.1-201ENST00000590850 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
AC040904.1-201ENST00000590850 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
AC040904.1-201ENST00000590850 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
AC040904.1-201ENST00000590850 FXR2P51116 673 aaKnown RBP eCLIP18.37■□□□□ 0.53
AC040904.1-201ENST00000590850 SPDYE1Q8NFV5 336 aaPredicted RBP18.28■□□□□ 0.52
AC040904.1-201ENST00000590850 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
AC040904.1-201ENST00000590850 SSUH2Q9Y2M2 353 aa18.27■□□□□ 0.52
AC040904.1-201ENST00000590850 SP7Q8TDD2 431 aaPredicted RBP18.26■□□□□ 0.51
AC040904.1-201ENST00000590850 HAX1O00165 279 aa18.24■□□□□ 0.51
AC040904.1-201ENST00000590850 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
AC040904.1-201ENST00000590850 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
AC040904.1-201ENST00000590850 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
AC040904.1-201ENST00000590850 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
AC040904.1-201ENST00000590850 EVX2Q03828 476 aa17.88■□□□□ 0.45
AC040904.1-201ENST00000590850 CHADLQ6NUI6 762 aa17.87■□□□□ 0.45
AC040904.1-201ENST00000590850 C19orf67A6NJJ6 358 aa17.79■□□□□ 0.44
AC040904.1-201ENST00000590850 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
AC040904.1-201ENST00000590850 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
AC040904.1-201ENST00000590850 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
AC040904.1-201ENST00000590850 GABBR2O75899 941 aa17.55■□□□□ 0.4
AC040904.1-201ENST00000590850 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
AC040904.1-201ENST00000590850 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
AC040904.1-201ENST00000590850 CLCN6P51797 869 aa17.33■□□□□ 0.36
AC040904.1-201ENST00000590850 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
AC040904.1-201ENST00000590850 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
AC040904.1-201ENST00000590850 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
AC040904.1-201ENST00000590850 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
AC040904.1-201ENST00000590850 DCBLD2Q96PD2 775 aa17.16■□□□□ 0.34
AC040904.1-201ENST00000590850 LHX8Q68G74 356 aa17.14■□□□□ 0.33
AC040904.1-201ENST00000590850 PROM2Q8N271 834 aa17.14■□□□□ 0.33
AC040904.1-201ENST00000590850 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
AC040904.1-201ENST00000590850 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
AC040904.1-201ENST00000590850 PHF12Q96QT6 1004 aa17.01■□□□□ 0.31
AC040904.1-201ENST00000590850 GALR2O43603 387 aaPredicted RBP17■□□□□ 0.31
AC040904.1-201ENST00000590850 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
AC040904.1-201ENST00000590850 MIER1Q8N108 512 aa16.9■□□□□ 0.3
AC040904.1-201ENST00000590850 TSPYL2Q9H2G4 693 aaPredicted RBP16.87■□□□□ 0.29
AC040904.1-201ENST00000590850 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
AC040904.1-201ENST00000590850 MS4A3Q96HJ5 214 aa16.77■□□□□ 0.28
AC040904.1-201ENST00000590850 FKBP8Q14318 412 aa16.76■□□□□ 0.27
AC040904.1-201ENST00000590850 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms