RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
PDE4A-207ENST00000590407 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
PDE4A-207ENST00000590407 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
PDE4A-207ENST00000590407 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
PDE4A-207ENST00000590407 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
PDE4A-207ENST00000590407 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
PDE4A-207ENST00000590407 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
PDE4A-207ENST00000590407 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
PDE4A-207ENST00000590407 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
PDE4A-207ENST00000590407 ABCC9O60706 1549 aa20.46■□□□□ 0.87
PDE4A-207ENST00000590407 HRCP23327 699 aa20.46■□□□□ 0.87
PDE4A-207ENST00000590407 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
PDE4A-207ENST00000590407 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
PDE4A-207ENST00000590407 SCRIBQ14160 1630 aa20.14■□□□□ 0.82
PDE4A-207ENST00000590407 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
PDE4A-207ENST00000590407 NACADO15069 1562 aa20.06■□□□□ 0.8
PDE4A-207ENST00000590407 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
PDE4A-207ENST00000590407 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
PDE4A-207ENST00000590407 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
PDE4A-207ENST00000590407 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
PDE4A-207ENST00000590407 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
PDE4A-207ENST00000590407 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
PDE4A-207ENST00000590407 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
PDE4A-207ENST00000590407 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
PDE4A-207ENST00000590407 WIZO95785 1651 aa19.62■□□□□ 0.73
PDE4A-207ENST00000590407 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
PDE4A-207ENST00000590407 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
PDE4A-207ENST00000590407 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
PDE4A-207ENST00000590407 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
PDE4A-207ENST00000590407 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
PDE4A-207ENST00000590407 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
PDE4A-207ENST00000590407 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
PDE4A-207ENST00000590407 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
PDE4A-207ENST00000590407 EEA1Q15075 1411 aa19.25■□□□□ 0.67
PDE4A-207ENST00000590407 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
PDE4A-207ENST00000590407 PEG3Q9GZU2 1588 aa19.16■□□□□ 0.66
PDE4A-207ENST00000590407 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
PDE4A-207ENST00000590407 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
PDE4A-207ENST00000590407 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
PDE4A-207ENST00000590407 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
PDE4A-207ENST00000590407 SOGA1O94964 1423 aa19.04■□□□□ 0.64
PDE4A-207ENST00000590407 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
PDE4A-207ENST00000590407 GOLGA3Q08378 1498 aa19■□□□□ 0.63
PDE4A-207ENST00000590407 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
PDE4A-207ENST00000590407 KIF21BO75037 1637 aa18.93■□□□□ 0.62
PDE4A-207ENST00000590407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
PDE4A-207ENST00000590407 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
PDE4A-207ENST00000590407 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.62
PDE4A-207ENST00000590407 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
PDE4A-207ENST00000590407 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
PDE4A-207ENST00000590407 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
PDE4A-207ENST00000590407 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
PDE4A-207ENST00000590407 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
PDE4A-207ENST00000590407 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
PDE4A-207ENST00000590407 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDE4A-207ENST00000590407 CLIP1P30622 1438 aa18.72■□□□□ 0.59
PDE4A-207ENST00000590407 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
PDE4A-207ENST00000590407 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
PDE4A-207ENST00000590407 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
PDE4A-207ENST00000590407 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
PDE4A-207ENST00000590407 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
PDE4A-207ENST00000590407 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
PDE4A-207ENST00000590407 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
PDE4A-207ENST00000590407 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
PDE4A-207ENST00000590407 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
PDE4A-207ENST00000590407 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
PDE4A-207ENST00000590407 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
PDE4A-207ENST00000590407 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
PDE4A-207ENST00000590407 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
PDE4A-207ENST00000590407 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
PDE4A-207ENST00000590407 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PDE4A-207ENST00000590407 APLP2Q06481 763 aa18.48■□□□□ 0.55
PDE4A-207ENST00000590407 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PDE4A-207ENST00000590407 CUX1P39880 1505 aa18.41■□□□□ 0.54
PDE4A-207ENST00000590407 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
PDE4A-207ENST00000590407 CFTRP13569 1480 aa18.39■□□□□ 0.53
PDE4A-207ENST00000590407 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
PDE4A-207ENST00000590407 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
PDE4A-207ENST00000590407 RRBP1Q9P2E9 1410 aaKnown RBP18.35■□□□□ 0.53
PDE4A-207ENST00000590407 CUX2O14529 1486 aa18.34■□□□□ 0.53
PDE4A-207ENST00000590407 PRDM2Q13029 1718 aa18.33■□□□□ 0.52
PDE4A-207ENST00000590407 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
PDE4A-207ENST00000590407 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
PDE4A-207ENST00000590407 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
PDE4A-207ENST00000590407 MIER1Q8N108 512 aa18.24■□□□□ 0.51
PDE4A-207ENST00000590407 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
PDE4A-207ENST00000590407 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
PDE4A-207ENST00000590407 IGF1RP08069 1367 aa18.14■□□□□ 0.5
PDE4A-207ENST00000590407 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
PDE4A-207ENST00000590407 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
PDE4A-207ENST00000590407 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
PDE4A-207ENST00000590407 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
PDE4A-207ENST00000590407 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
PDE4A-207ENST00000590407 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
PDE4A-207ENST00000590407 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
PDE4A-207ENST00000590407 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
PDE4A-207ENST00000590407 CFAP43Q8NDM7 1665 aa18.02■□□□□ 0.47
PDE4A-207ENST00000590407 MYT1Q01538 1121 aa18.01■□□□□ 0.47
PDE4A-207ENST00000590407 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
PDE4A-207ENST00000590407 RAB3GAP2Q9H2M9 1393 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms