RNA–Protein interactions for RNA: ENST00000590359.1

ABCA8-213, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 4

Gene ABCA8, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-213ENST00000590359 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
ABCA8-213ENST00000590359 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
ABCA8-213ENST00000590359 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
ABCA8-213ENST00000590359 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
ABCA8-213ENST00000590359 FOXD1Q16676 465 aa20.05■□□□□ 0.8
ABCA8-213ENST00000590359 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
ABCA8-213ENST00000590359 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
ABCA8-213ENST00000590359 MSH5O43196 834 aa18.76■□□□□ 0.59
ABCA8-213ENST00000590359 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
ABCA8-213ENST00000590359 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
ABCA8-213ENST00000590359 ADRA2BP18089 450 aa18.7■□□□□ 0.58
ABCA8-213ENST00000590359 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
ABCA8-213ENST00000590359 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
ABCA8-213ENST00000590359 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
ABCA8-213ENST00000590359 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
ABCA8-213ENST00000590359 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
ABCA8-213ENST00000590359 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
ABCA8-213ENST00000590359 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
ABCA8-213ENST00000590359 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
ABCA8-213ENST00000590359 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
ABCA8-213ENST00000590359 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
ABCA8-213ENST00000590359 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
ABCA8-213ENST00000590359 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
ABCA8-213ENST00000590359 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
ABCA8-213ENST00000590359 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
ABCA8-213ENST00000590359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
ABCA8-213ENST00000590359 KCNA4P22459 653 aa15.59■□□□□ 0.09
ABCA8-213ENST00000590359 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
ABCA8-213ENST00000590359 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
ABCA8-213ENST00000590359 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
ABCA8-213ENST00000590359 CAPN15O75808 1086 aa15.12■□□□□ 0.01
ABCA8-213ENST00000590359 DSG3P32926 999 aa14.99□□□□□ -0.01
ABCA8-213ENST00000590359 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
ABCA8-213ENST00000590359 APLP2Q06481 763 aa14.89□□□□□ -0.03
ABCA8-213ENST00000590359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
ABCA8-213ENST00000590359 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
ABCA8-213ENST00000590359 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
ABCA8-213ENST00000590359 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
ABCA8-213ENST00000590359 ABCB7O75027 752 aa14.79□□□□□ -0.04
ABCA8-213ENST00000590359 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
ABCA8-213ENST00000590359 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
ABCA8-213ENST00000590359 POTEHQ6S545 545 aa14.6□□□□□ -0.07
ABCA8-213ENST00000590359 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
ABCA8-213ENST00000590359 POLA2Q14181 598 aa14.46□□□□□ -0.09
ABCA8-213ENST00000590359 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
ABCA8-213ENST00000590359 ZBTB22O15209 634 aa14.33□□□□□ -0.12
ABCA8-213ENST00000590359 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
ABCA8-213ENST00000590359 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
ABCA8-213ENST00000590359 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
ABCA8-213ENST00000590359 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
ABCA8-213ENST00000590359 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
ABCA8-213ENST00000590359 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
ABCA8-213ENST00000590359 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
ABCA8-213ENST00000590359 FBLN2P98095 1184 aa13.81□□□□□ -0.2
ABCA8-213ENST00000590359 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
ABCA8-213ENST00000590359 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
ABCA8-213ENST00000590359 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
ABCA8-213ENST00000590359 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
ABCA8-213ENST00000590359 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
ABCA8-213ENST00000590359 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
ABCA8-213ENST00000590359 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
ABCA8-213ENST00000590359 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
ABCA8-213ENST00000590359 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
ABCA8-213ENST00000590359 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
ABCA8-213ENST00000590359 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
ABCA8-213ENST00000590359 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
ABCA8-213ENST00000590359 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
ABCA8-213ENST00000590359 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
ABCA8-213ENST00000590359 HAX1O00165 279 aa13.46□□□□□ -0.25
ABCA8-213ENST00000590359 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
ABCA8-213ENST00000590359 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
ABCA8-213ENST00000590359 EVX2Q03828 476 aa13.3□□□□□ -0.28
ABCA8-213ENST00000590359 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
ABCA8-213ENST00000590359 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
ABCA8-213ENST00000590359 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
ABCA8-213ENST00000590359 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
ABCA8-213ENST00000590359 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
ABCA8-213ENST00000590359 GABBR2O75899 941 aa12.96□□□□□ -0.33
ABCA8-213ENST00000590359 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
ABCA8-213ENST00000590359 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
ABCA8-213ENST00000590359 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
ABCA8-213ENST00000590359 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
ABCA8-213ENST00000590359 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
ABCA8-213ENST00000590359 LHX8Q68G74 356 aa12.71□□□□□ -0.37
ABCA8-213ENST00000590359 CLCN6P51797 869 aa12.69□□□□□ -0.38
ABCA8-213ENST00000590359 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
ABCA8-213ENST00000590359 PROM2Q8N271 834 aa12.68□□□□□ -0.38
ABCA8-213ENST00000590359 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
ABCA8-213ENST00000590359 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
ABCA8-213ENST00000590359 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
ABCA8-213ENST00000590359 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
ABCA8-213ENST00000590359 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
ABCA8-213ENST00000590359 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
ABCA8-213ENST00000590359 MIER1Q8N108 512 aa12.48□□□□□ -0.41
ABCA8-213ENST00000590359 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
ABCA8-213ENST00000590359 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
ABCA8-213ENST00000590359 FKBP8Q14318 412 aa12.42□□□□□ -0.42
ABCA8-213ENST00000590359 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
ABCA8-213ENST00000590359 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
ABCA8-213ENST00000590359 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms