RNA–Protein interactions for RNA: ENST00000590309.1

AC004223.2-201, humanhuman

BASIC

Gene AC004223.2, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004223.2-201ENST00000590309 AEBP2Q6ZN18 517 aaPredicted RBP39.47■■■■□ 3.91
AC004223.2-201ENST00000590309 CHIC1Q5VXU3 224 aa37.31■■■■□ 3.56
AC004223.2-201ENST00000590309 SENP3Q9H4L4 574 aaPredicted RBP33.92■■■■□ 3.02
AC004223.2-201ENST00000590309 PHF23Q9BUL5 403 aaPredicted RBP33.36■■■□□ 2.93
AC004223.2-201ENST00000590309 FOXD1Q16676 465 aa31.52■■■□□ 2.64
AC004223.2-201ENST00000590309 PLPPR3Q6T4P5 718 aa29.78■■■□□ 2.36
AC004223.2-201ENST00000590309 MSH5O43196 834 aa29.76■■■□□ 2.35
AC004223.2-201ENST00000590309 PIAS4Q8N2W9 510 aaPredicted RBP29.5■■■□□ 2.31
AC004223.2-201ENST00000590309 POTEDQ86YR6 584 aa29.42■■■□□ 2.3
AC004223.2-201ENST00000590309 PPP6R1Q9UPN7 881 aa29.19■■■□□ 2.26
AC004223.2-201ENST00000590309 ADRA2BP18089 450 aa29.15■■■□□ 2.26
AC004223.2-201ENST00000590309 SCAF1Q9H7N4 1312 aaKnown RBP26.89■■□□□ 1.89
AC004223.2-201ENST00000590309 MAPK8IP2Q13387 824 aaPredicted RBP26.83■■□□□ 1.89
AC004223.2-201ENST00000590309 DMRT2Q9Y5R5 561 aa26.78■■□□□ 1.88
AC004223.2-201ENST00000590309 PPP4R3CPQ6ZMV5 832 aa26.01■■□□□ 1.75
AC004223.2-201ENST00000590309 DCAF8L1A6NGE4 600 aa25.87■■□□□ 1.73
AC004223.2-201ENST00000590309 CACNB1Q02641 598 aaPredicted RBP25.73■■□□□ 1.71
AC004223.2-201ENST00000590309 HOXD11P31277 338 aaPredicted RBP25.66■■□□□ 1.7
AC004223.2-201ENST00000590309 CNKSR2Q8WXI2 1034 aa25.63■■□□□ 1.69
AC004223.2-201ENST00000590309 RNF216Q9NWF9 866 aaPredicted RBP25.45■■□□□ 1.66
AC004223.2-201ENST00000590309 RNF39Q9H2S5 420 aa25.27■■□□□ 1.64
AC004223.2-201ENST00000590309 NCBP3Q53F19 620 aaKnown RBP25.06■■□□□ 1.6
AC004223.2-201ENST00000590309 C1QBPQ07021 282 aaKnown RBP24.96■■□□□ 1.59
AC004223.2-201ENST00000590309 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
AC004223.2-201ENST00000590309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.6■■□□□ 1.53
AC004223.2-201ENST00000590309 NPM3O75607 178 aaKnown RBP24.53■■□□□ 1.52
AC004223.2-201ENST00000590309 U3KPZ7 1027 aaPredicted RBP23.9■■□□□ 1.42
AC004223.2-201ENST00000590309 KCNA4P22459 653 aa23.79■■□□□ 1.4
AC004223.2-201ENST00000590309 CAPN15O75808 1086 aa23.76■■□□□ 1.39
AC004223.2-201ENST00000590309 SPINK5Q9NQ38 1064 aaPredicted RBP23.64■■□□□ 1.37
AC004223.2-201ENST00000590309 DSG3P32926 999 aa23.56■■□□□ 1.36
AC004223.2-201ENST00000590309 APLP2Q06481 763 aa23.46■■□□□ 1.35
AC004223.2-201ENST00000590309 SLC4A2P04920 1241 aa23.43■■□□□ 1.34
AC004223.2-201ENST00000590309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
AC004223.2-201ENST00000590309 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
AC004223.2-201ENST00000590309 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
AC004223.2-201ENST00000590309 ZNF219Q9P2Y4 722 aaPredicted RBP23.26■■□□□ 1.31
AC004223.2-201ENST00000590309 SAMD1Q6SPF0 538 aaPredicted RBP23.13■■□□□ 1.29
AC004223.2-201ENST00000590309 ABCB7O75027 752 aa23.12■■□□□ 1.29
AC004223.2-201ENST00000590309 POTEHQ6S545 545 aa23.05■■□□□ 1.28
AC004223.2-201ENST00000590309 MYCNP04198 464 aaPredicted RBP22.78■■□□□ 1.24
AC004223.2-201ENST00000590309 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
AC004223.2-201ENST00000590309 POLA2Q14181 598 aa22.56■■□□□ 1.2
AC004223.2-201ENST00000590309 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
AC004223.2-201ENST00000590309 FOXD4L1Q9NU39 408 aa22.37■■□□□ 1.17
AC004223.2-201ENST00000590309 ZBTB12Q9Y330 459 aaPredicted RBP22.19■■□□□ 1.14
AC004223.2-201ENST00000590309 CHRDL2Q6WN34 429 aa22.18■■□□□ 1.14
AC004223.2-201ENST00000590309 ATF5Q9Y2D1 282 aaPredicted RBP22.12■■□□□ 1.13
AC004223.2-201ENST00000590309 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
AC004223.2-201ENST00000590309 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
AC004223.2-201ENST00000590309 ZBTB22O15209 634 aa21.77■■□□□ 1.08
AC004223.2-201ENST00000590309 REM2Q8IYK8 340 aaPredicted RBP21.75■■□□□ 1.07
AC004223.2-201ENST00000590309 ATXN8OSP0DMR3 200 aa21.72■■□□□ 1.07
AC004223.2-201ENST00000590309 PIP4P2Q8N4L2 257 aa21.54■■□□□ 1.04
AC004223.2-201ENST00000590309 FBLN2P98095 1184 aa21.53■■□□□ 1.04
AC004223.2-201ENST00000590309 PITPNM1O00562 1244 aa21.51■■□□□ 1.03
AC004223.2-201ENST00000590309 SP7Q8TDD2 431 aaPredicted RBP21.48■■□□□ 1.03
AC004223.2-201ENST00000590309 SPDYE2BA6NHP3 402 aa21.4■■□□□ 1.02
AC004223.2-201ENST00000590309 SPDYE6P0CI01 402 aa21.4■■□□□ 1.02
AC004223.2-201ENST00000590309 SPDYE2Q495Y8 402 aa21.4■■□□□ 1.02
AC004223.2-201ENST00000590309 HAX1O00165 279 aa21.35■■□□□ 1.01
AC004223.2-201ENST00000590309 FXR2P51116 673 aaKnown RBP eCLIP21.35■■□□□ 1.01
AC004223.2-201ENST00000590309 SPDYE1Q8NFV5 336 aaPredicted RBP21.14■□□□□ 0.97
AC004223.2-201ENST00000590309 CLEC11AQ9Y240 323 aa21.14■□□□□ 0.97
AC004223.2-201ENST00000590309 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
AC004223.2-201ENST00000590309 MKRN4PQ13434 485 aaPredicted RBP21.09■□□□□ 0.97
AC004223.2-201ENST00000590309 PRKAR2AP13861 404 aaKnown RBP21■□□□□ 0.95
AC004223.2-201ENST00000590309 SSUH2Q9Y2M2 353 aa20.99■□□□□ 0.95
AC004223.2-201ENST00000590309 EVX2Q03828 476 aa20.84■□□□□ 0.93
AC004223.2-201ENST00000590309 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
AC004223.2-201ENST00000590309 PRR29P0C7W0 189 aa20.74■□□□□ 0.91
AC004223.2-201ENST00000590309 C19orf67A6NJJ6 358 aa20.69■□□□□ 0.9
AC004223.2-201ENST00000590309 CHADLQ6NUI6 762 aa20.66■□□□□ 0.9
AC004223.2-201ENST00000590309 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
AC004223.2-201ENST00000590309 GABBR2O75899 941 aa20.48■□□□□ 0.87
AC004223.2-201ENST00000590309 FARP1Q9Y4F1 1045 aaPredicted RBP20.35■□□□□ 0.85
AC004223.2-201ENST00000590309 CD44P16070 742 aaKnown RBP20.33■□□□□ 0.85
AC004223.2-201ENST00000590309 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
AC004223.2-201ENST00000590309 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
AC004223.2-201ENST00000590309 CLCN6P51797 869 aa20.19■□□□□ 0.82
AC004223.2-201ENST00000590309 LHX8Q68G74 356 aa20.17■□□□□ 0.82
AC004223.2-201ENST00000590309 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
AC004223.2-201ENST00000590309 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
AC004223.2-201ENST00000590309 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
AC004223.2-201ENST00000590309 DCBLD2Q96PD2 775 aa20■□□□□ 0.79
AC004223.2-201ENST00000590309 ZNF579Q8NAF0 562 aaKnown RBP19.95■□□□□ 0.78
AC004223.2-201ENST00000590309 POTEIP0CG38 1075 aa19.93■□□□□ 0.78
AC004223.2-201ENST00000590309 PAK3O75914 559 aaPredicted RBP19.92■□□□□ 0.78
AC004223.2-201ENST00000590309 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.77
AC004223.2-201ENST00000590309 GALR2O43603 387 aaPredicted RBP19.7■□□□□ 0.74
AC004223.2-201ENST00000590309 PHF12Q96QT6 1004 aa19.64■□□□□ 0.73
AC004223.2-201ENST00000590309 MNX1P50219 401 aaPredicted RBP19.57■□□□□ 0.72
AC004223.2-201ENST00000590309 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
AC004223.2-201ENST00000590309 PROM2Q8N271 834 aa19.42■□□□□ 0.7
AC004223.2-201ENST00000590309 TSPYL2Q9H2G4 693 aaPredicted RBP19.39■□□□□ 0.69
AC004223.2-201ENST00000590309 MS4A3Q96HJ5 214 aa19.37■□□□□ 0.69
AC004223.2-201ENST00000590309 OTUD5Q96G74 571 aa19.31■□□□□ 0.68
AC004223.2-201ENST00000590309 ASTLQ6HA08 431 aaPredicted RBP19.29■□□□□ 0.68
AC004223.2-201ENST00000590309 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
AC004223.2-201ENST00000590309 MIER1Q8N108 512 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms