RNA–Protein interactions for RNA: ENST00000588843.1

AC012254.4-201, humanhuman

BASIC

Gene AC012254.4, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012254.4-201ENST00000588843 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
AC012254.4-201ENST00000588843 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
AC012254.4-201ENST00000588843 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
AC012254.4-201ENST00000588843 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
AC012254.4-201ENST00000588843 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
AC012254.4-201ENST00000588843 FOXD1Q16676 465 aa15.96■□□□□ 0.15
AC012254.4-201ENST00000588843 ADRA2BP18089 450 aa15.71■□□□□ 0.11
AC012254.4-201ENST00000588843 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
AC012254.4-201ENST00000588843 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
AC012254.4-201ENST00000588843 KCNA4P22459 653 aa15.01□□□□□ -0.01
AC012254.4-201ENST00000588843 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
AC012254.4-201ENST00000588843 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
AC012254.4-201ENST00000588843 MSH5O43196 834 aa14.71□□□□□ -0.05
AC012254.4-201ENST00000588843 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
AC012254.4-201ENST00000588843 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
AC012254.4-201ENST00000588843 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
AC012254.4-201ENST00000588843 CNKSR2Q8WXI2 1034 aa14.44□□□□□ -0.1
AC012254.4-201ENST00000588843 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
AC012254.4-201ENST00000588843 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
AC012254.4-201ENST00000588843 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
AC012254.4-201ENST00000588843 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
AC012254.4-201ENST00000588843 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
AC012254.4-201ENST00000588843 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
AC012254.4-201ENST00000588843 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
AC012254.4-201ENST00000588843 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
AC012254.4-201ENST00000588843 ZBTB22O15209 634 aa13.75□□□□□ -0.21
AC012254.4-201ENST00000588843 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
AC012254.4-201ENST00000588843 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
AC012254.4-201ENST00000588843 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
AC012254.4-201ENST00000588843 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
AC012254.4-201ENST00000588843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
AC012254.4-201ENST00000588843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
AC012254.4-201ENST00000588843 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
AC012254.4-201ENST00000588843 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
AC012254.4-201ENST00000588843 POTEDQ86YR6 584 aa13.04□□□□□ -0.32
AC012254.4-201ENST00000588843 APLP2Q06481 763 aa12.99□□□□□ -0.33
AC012254.4-201ENST00000588843 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
AC012254.4-201ENST00000588843 FKBP8Q14318 412 aa12.81□□□□□ -0.36
AC012254.4-201ENST00000588843 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
AC012254.4-201ENST00000588843 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
AC012254.4-201ENST00000588843 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
AC012254.4-201ENST00000588843 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
AC012254.4-201ENST00000588843 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
AC012254.4-201ENST00000588843 FBLN2P98095 1184 aa12.5□□□□□ -0.41
AC012254.4-201ENST00000588843 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
AC012254.4-201ENST00000588843 CAPN15O75808 1086 aa12.47□□□□□ -0.41
AC012254.4-201ENST00000588843 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
AC012254.4-201ENST00000588843 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
AC012254.4-201ENST00000588843 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
AC012254.4-201ENST00000588843 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
AC012254.4-201ENST00000588843 POLA2Q14181 598 aa12.38□□□□□ -0.43
AC012254.4-201ENST00000588843 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
AC012254.4-201ENST00000588843 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
AC012254.4-201ENST00000588843 PROM2Q8N271 834 aa12.2□□□□□ -0.46
AC012254.4-201ENST00000588843 ABCB7O75027 752 aa12.19□□□□□ -0.46
AC012254.4-201ENST00000588843 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
AC012254.4-201ENST00000588843 DSG3P32926 999 aa12.08□□□□□ -0.48
AC012254.4-201ENST00000588843 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
AC012254.4-201ENST00000588843 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
AC012254.4-201ENST00000588843 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
AC012254.4-201ENST00000588843 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
AC012254.4-201ENST00000588843 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
AC012254.4-201ENST00000588843 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
AC012254.4-201ENST00000588843 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
AC012254.4-201ENST00000588843 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
AC012254.4-201ENST00000588843 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
AC012254.4-201ENST00000588843 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
AC012254.4-201ENST00000588843 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
AC012254.4-201ENST00000588843 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
AC012254.4-201ENST00000588843 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
AC012254.4-201ENST00000588843 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
AC012254.4-201ENST00000588843 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
AC012254.4-201ENST00000588843 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
AC012254.4-201ENST00000588843 MIER1Q8N108 512 aa11.71□□□□□ -0.53
AC012254.4-201ENST00000588843 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
AC012254.4-201ENST00000588843 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
AC012254.4-201ENST00000588843 PKD2Q13563 968 aa11.65□□□□□ -0.54
AC012254.4-201ENST00000588843 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
AC012254.4-201ENST00000588843 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
AC012254.4-201ENST00000588843 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
AC012254.4-201ENST00000588843 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
AC012254.4-201ENST00000588843 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
AC012254.4-201ENST00000588843 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
AC012254.4-201ENST00000588843 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
AC012254.4-201ENST00000588843 GSE1Q14687 1217 aa11.44□□□□□ -0.58
AC012254.4-201ENST00000588843 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
AC012254.4-201ENST00000588843 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
AC012254.4-201ENST00000588843 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
AC012254.4-201ENST00000588843 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
AC012254.4-201ENST00000588843 RGL2O15211 777 aa11.38□□□□□ -0.59
AC012254.4-201ENST00000588843 REM2Q8IYK8 340 aaPredicted RBP11.38□□□□□ -0.59
AC012254.4-201ENST00000588843 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
AC012254.4-201ENST00000588843 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
AC012254.4-201ENST00000588843 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
AC012254.4-201ENST00000588843 NUBP1P53384 320 aa11.29□□□□□ -0.6
AC012254.4-201ENST00000588843 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
AC012254.4-201ENST00000588843 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC012254.4-201ENST00000588843 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
AC012254.4-201ENST00000588843 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
AC012254.4-201ENST00000588843 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms