RNA–Protein interactions for RNA: ENST00000588803.1

AC009271.1-202, humanhuman

TSL 3 BASIC

Gene AC009271.1, Length 492 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009271.1-202ENST00000588803 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
AC009271.1-202ENST00000588803 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
AC009271.1-202ENST00000588803 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
AC009271.1-202ENST00000588803 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
AC009271.1-202ENST00000588803 FOXD1Q16676 465 aa16.18■□□□□ 0.18
AC009271.1-202ENST00000588803 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
AC009271.1-202ENST00000588803 MSH5O43196 834 aa15.18■□□□□ 0.02
AC009271.1-202ENST00000588803 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
AC009271.1-202ENST00000588803 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
AC009271.1-202ENST00000588803 PPP6R1Q9UPN7 881 aa14.97□□□□□ -0.01
AC009271.1-202ENST00000588803 ADRA2BP18089 450 aa14.89□□□□□ -0.03
AC009271.1-202ENST00000588803 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
AC009271.1-202ENST00000588803 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
AC009271.1-202ENST00000588803 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
AC009271.1-202ENST00000588803 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
AC009271.1-202ENST00000588803 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
AC009271.1-202ENST00000588803 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
AC009271.1-202ENST00000588803 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
AC009271.1-202ENST00000588803 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
AC009271.1-202ENST00000588803 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
AC009271.1-202ENST00000588803 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
AC009271.1-202ENST00000588803 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
AC009271.1-202ENST00000588803 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
AC009271.1-202ENST00000588803 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
AC009271.1-202ENST00000588803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC009271.1-202ENST00000588803 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
AC009271.1-202ENST00000588803 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
AC009271.1-202ENST00000588803 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
AC009271.1-202ENST00000588803 DSG3P32926 999 aa12.07□□□□□ -0.48
AC009271.1-202ENST00000588803 CAPN15O75808 1086 aa12.06□□□□□ -0.48
AC009271.1-202ENST00000588803 KCNA4P22459 653 aa12□□□□□ -0.49
AC009271.1-202ENST00000588803 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
AC009271.1-202ENST00000588803 POTEHQ6S545 545 aa11.9□□□□□ -0.5
AC009271.1-202ENST00000588803 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
AC009271.1-202ENST00000588803 ABCB7O75027 752 aa11.78□□□□□ -0.52
AC009271.1-202ENST00000588803 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
AC009271.1-202ENST00000588803 APLP2Q06481 763 aa11.75□□□□□ -0.53
AC009271.1-202ENST00000588803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
AC009271.1-202ENST00000588803 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
AC009271.1-202ENST00000588803 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
AC009271.1-202ENST00000588803 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
AC009271.1-202ENST00000588803 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
AC009271.1-202ENST00000588803 POLA2Q14181 598 aa11.44□□□□□ -0.58
AC009271.1-202ENST00000588803 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
AC009271.1-202ENST00000588803 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
AC009271.1-202ENST00000588803 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
AC009271.1-202ENST00000588803 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
AC009271.1-202ENST00000588803 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
AC009271.1-202ENST00000588803 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
AC009271.1-202ENST00000588803 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
AC009271.1-202ENST00000588803 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
AC009271.1-202ENST00000588803 ZBTB22O15209 634 aa11.05□□□□□ -0.64
AC009271.1-202ENST00000588803 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
AC009271.1-202ENST00000588803 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
AC009271.1-202ENST00000588803 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
AC009271.1-202ENST00000588803 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
AC009271.1-202ENST00000588803 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
AC009271.1-202ENST00000588803 HAX1O00165 279 aa10.88□□□□□ -0.67
AC009271.1-202ENST00000588803 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
AC009271.1-202ENST00000588803 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
AC009271.1-202ENST00000588803 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
AC009271.1-202ENST00000588803 FBLN2P98095 1184 aa10.78□□□□□ -0.68
AC009271.1-202ENST00000588803 EVX2Q03828 476 aa10.78□□□□□ -0.68
AC009271.1-202ENST00000588803 MKRN4PQ13434 485 aaPredicted RBP10.75□□□□□ -0.69
AC009271.1-202ENST00000588803 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
AC009271.1-202ENST00000588803 PRKAR2AP13861 404 aaKnown RBP10.68□□□□□ -0.7
AC009271.1-202ENST00000588803 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
AC009271.1-202ENST00000588803 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
AC009271.1-202ENST00000588803 ZNF692Q9BU19 519 aaPredicted RBP10.65□□□□□ -0.7
AC009271.1-202ENST00000588803 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
AC009271.1-202ENST00000588803 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
AC009271.1-202ENST00000588803 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
AC009271.1-202ENST00000588803 GABBR2O75899 941 aa10.49□□□□□ -0.73
AC009271.1-202ENST00000588803 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
AC009271.1-202ENST00000588803 LHX8Q68G74 356 aa10.35□□□□□ -0.75
AC009271.1-202ENST00000588803 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
AC009271.1-202ENST00000588803 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
AC009271.1-202ENST00000588803 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
AC009271.1-202ENST00000588803 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
AC009271.1-202ENST00000588803 CLCN6P51797 869 aa10.19□□□□□ -0.78
AC009271.1-202ENST00000588803 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
AC009271.1-202ENST00000588803 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
AC009271.1-202ENST00000588803 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
AC009271.1-202ENST00000588803 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
AC009271.1-202ENST00000588803 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
AC009271.1-202ENST00000588803 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
AC009271.1-202ENST00000588803 GALR2O43603 387 aaPredicted RBP10.07□□□□□ -0.8
AC009271.1-202ENST00000588803 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
AC009271.1-202ENST00000588803 PHF12Q96QT6 1004 aa10□□□□□ -0.81
AC009271.1-202ENST00000588803 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
AC009271.1-202ENST00000588803 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
AC009271.1-202ENST00000588803 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
AC009271.1-202ENST00000588803 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
AC009271.1-202ENST00000588803 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
AC009271.1-202ENST00000588803 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
AC009271.1-202ENST00000588803 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
AC009271.1-202ENST00000588803 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
AC009271.1-202ENST00000588803 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
AC009271.1-202ENST00000588803 PROM2Q8N271 834 aa9.83□□□□□ -0.84
AC009271.1-202ENST00000588803 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms