RNA–Protein interactions for RNA: ENST00000588511.5

TRMT1-211, Transcript of tRNA methyltransferase 1, humanhuman

TSL 5

Gene TRMT1, Length 2,251 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-211ENST00000588511 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
TRMT1-211ENST00000588511 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
TRMT1-211ENST00000588511 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
TRMT1-211ENST00000588511 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
TRMT1-211ENST00000588511 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
TRMT1-211ENST00000588511 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
TRMT1-211ENST00000588511 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
TRMT1-211ENST00000588511 CHIC1Q5VXU3 224 aa33.27■■■□□ 2.92
TRMT1-211ENST00000588511 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
TRMT1-211ENST00000588511 ABCC9O60706 1549 aa32.83■■■□□ 2.85
TRMT1-211ENST00000588511 SCRIBQ14160 1630 aa32.71■■■□□ 2.83
TRMT1-211ENST00000588511 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.8
TRMT1-211ENST00000588511 NACADO15069 1562 aa32.47■■■□□ 2.79
TRMT1-211ENST00000588511 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
TRMT1-211ENST00000588511 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
TRMT1-211ENST00000588511 HRCP23327 699 aa32.16■■■□□ 2.74
TRMT1-211ENST00000588511 PCGF6Q9BYE7 350 aa32.08■■■□□ 2.73
TRMT1-211ENST00000588511 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
TRMT1-211ENST00000588511 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
TRMT1-211ENST00000588511 TRIM41Q8WV44 630 aa31.91■■■□□ 2.7
TRMT1-211ENST00000588511 WIZO95785 1651 aa31.72■■■□□ 2.67
TRMT1-211ENST00000588511 TRIM26Q12899 539 aaPredicted RBP31.64■■■□□ 2.66
TRMT1-211ENST00000588511 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.66
TRMT1-211ENST00000588511 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
TRMT1-211ENST00000588511 EIF4G1Q04637 1599 aaKnown RBP31.35■■■□□ 2.61
TRMT1-211ENST00000588511 SMARCA4P51532 1647 aa31.34■■■□□ 2.61
TRMT1-211ENST00000588511 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
TRMT1-211ENST00000588511 UNC13AQ9UPW8 1703 aa31.3■■■□□ 2.6
TRMT1-211ENST00000588511 PPARGC1BQ86YN6 1023 aaKnown RBP31.3■■■□□ 2.6
TRMT1-211ENST00000588511 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
TRMT1-211ENST00000588511 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
TRMT1-211ENST00000588511 EHMT2Q96KQ7 1210 aa31.1■■■□□ 2.57
TRMT1-211ENST00000588511 ZEB1P37275 1124 aaPredicted RBP31.02■■■□□ 2.56
TRMT1-211ENST00000588511 BICRAQ9NZM4 1560 aa30.98■■■□□ 2.55
TRMT1-211ENST00000588511 ABCC8Q09428 1581 aa30.95■■■□□ 2.55
TRMT1-211ENST00000588511 PABPN1Q86U42 306 aaKnown RBP eCLIP30.88■■■□□ 2.536e-7■■■□□ 15.9
TRMT1-211ENST00000588511 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
TRMT1-211ENST00000588511 EEA1Q15075 1411 aa30.73■■■□□ 2.51
TRMT1-211ENST00000588511 SOGA1O94964 1423 aa30.68■■■□□ 2.5
TRMT1-211ENST00000588511 WRNQ14191 1432 aaPredicted RBP eCLIP30.62■■■□□ 2.49
TRMT1-211ENST00000588511 TNIKQ9UKE5 1360 aa30.6■■■□□ 2.49
TRMT1-211ENST00000588511 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
TRMT1-211ENST00000588511 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
TRMT1-211ENST00000588511 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
TRMT1-211ENST00000588511 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
TRMT1-211ENST00000588511 BAZ1BQ9UIG0 1483 aaKnown RBP30.47■■■□□ 2.47
TRMT1-211ENST00000588511 GOLGA3Q08378 1498 aa30.42■■■□□ 2.46
TRMT1-211ENST00000588511 UBTFP17480 764 aaKnown RBP30.38■■■□□ 2.45
TRMT1-211ENST00000588511 SYNJ1O43426 1573 aa30.35■■■□□ 2.45
TRMT1-211ENST00000588511 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
TRMT1-211ENST00000588511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.24■■■□□ 2.43
TRMT1-211ENST00000588511 KIF21BO75037 1637 aa30.24■■■□□ 2.43
TRMT1-211ENST00000588511 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
TRMT1-211ENST00000588511 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
TRMT1-211ENST00000588511 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
TRMT1-211ENST00000588511 CLIP1P30622 1438 aa30.04■■■□□ 2.4
TRMT1-211ENST00000588511 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
TRMT1-211ENST00000588511 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
TRMT1-211ENST00000588511 BIVM-ERCC5R4GMW8 1640 aa29.97■■■□□ 2.39
TRMT1-211ENST00000588511 RAPGEF2Q9Y4G8 1499 aa29.96■■■□□ 2.39
TRMT1-211ENST00000588511 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
TRMT1-211ENST00000588511 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
TRMT1-211ENST00000588511 APLP2Q06481 763 aa29.77■■■□□ 2.36
TRMT1-211ENST00000588511 PRXQ9BXM0 1461 aa29.76■■■□□ 2.36
TRMT1-211ENST00000588511 CFTRP13569 1480 aa29.75■■■□□ 2.35
TRMT1-211ENST00000588511 CUX1P39880 1505 aa29.74■■■□□ 2.35
TRMT1-211ENST00000588511 KIF27Q86VH2 1401 aa29.66■■■□□ 2.34
TRMT1-211ENST00000588511 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
TRMT1-211ENST00000588511 HNRNPUL2Q1KMD3 747 aaKnown RBP29.61■■■□□ 2.33
TRMT1-211ENST00000588511 DIEXFQ68CQ4 756 aaKnown RBP29.61■■■□□ 2.33
TRMT1-211ENST00000588511 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
TRMT1-211ENST00000588511 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
TRMT1-211ENST00000588511 SCAF1Q9H7N4 1312 aaKnown RBP29.48■■■□□ 2.31
TRMT1-211ENST00000588511 ZNF316A6NFI3 1004 aaPredicted RBP29.47■■■□□ 2.31
TRMT1-211ENST00000588511 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
TRMT1-211ENST00000588511 ACIN1Q9UKV3 1341 aaKnown RBP29.33■■■□□ 2.29
TRMT1-211ENST00000588511 CUX2O14529 1486 aa29.32■■■□□ 2.28
TRMT1-211ENST00000588511 ARHGAP35Q9NRY4 1499 aa29.3■■■□□ 2.28
TRMT1-211ENST00000588511 KANK4Q5T7N3 995 aaPredicted RBP29.3■■■□□ 2.28
TRMT1-211ENST00000588511 IGF1RP08069 1367 aa29.3■■■□□ 2.28
TRMT1-211ENST00000588511 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
TRMT1-211ENST00000588511 CLSPNQ9HAW4 1339 aa29.25■■■□□ 2.27
TRMT1-211ENST00000588511 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
TRMT1-211ENST00000588511 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
TRMT1-211ENST00000588511 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
TRMT1-211ENST00000588511 CC2D2AQ9P2K1 1620 aa29.19■■■□□ 2.26
TRMT1-211ENST00000588511 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
TRMT1-211ENST00000588511 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
TRMT1-211ENST00000588511 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
TRMT1-211ENST00000588511 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
TRMT1-211ENST00000588511 MAP3K1Q13233 1512 aa29.08■■■□□ 2.25
TRMT1-211ENST00000588511 TIAM1Q13009 1591 aa29■■■□□ 2.23
TRMT1-211ENST00000588511 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
TRMT1-211ENST00000588511 PELP1Q8IZL8 1130 aaKnown RBP28.99■■■□□ 2.23
TRMT1-211ENST00000588511 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
TRMT1-211ENST00000588511 ABCA10Q8WWZ4 1543 aa28.94■■■□□ 2.22
TRMT1-211ENST00000588511 MIER1Q8N108 512 aa28.94■■■□□ 2.22
TRMT1-211ENST00000588511 GTF3C3Q9Y5Q9 886 aa28.92■■■□□ 2.22
TRMT1-211ENST00000588511 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
TRMT1-211ENST00000588511 LRRC9Q6ZRR7 1453 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms