RNA–Protein interactions for RNA: ENST00000587797.1

ATP6V0A1-214, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 1,878 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-214ENST00000587797 NISCHQ9Y2I1 1504 aa31.68■■■□□ 2.66
ATP6V0A1-214ENST00000587797 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
ATP6V0A1-214ENST00000587797 ZCCHC6Q5VYS8 1495 aaKnown RBP26.83■■□□□ 1.89
ATP6V0A1-214ENST00000587797 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
ATP6V0A1-214ENST00000587797 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
ATP6V0A1-214ENST00000587797 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
ATP6V0A1-214ENST00000587797 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
ATP6V0A1-214ENST00000587797 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
ATP6V0A1-214ENST00000587797 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
ATP6V0A1-214ENST00000587797 ABCC9O60706 1549 aa25.31■■□□□ 1.64
ATP6V0A1-214ENST00000587797 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
ATP6V0A1-214ENST00000587797 NACADO15069 1562 aa25.03■■□□□ 1.6
ATP6V0A1-214ENST00000587797 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
ATP6V0A1-214ENST00000587797 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
ATP6V0A1-214ENST00000587797 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
ATP6V0A1-214ENST00000587797 HRCP23327 699 aa24.55■■□□□ 1.52
ATP6V0A1-214ENST00000587797 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
ATP6V0A1-214ENST00000587797 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
ATP6V0A1-214ENST00000587797 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
ATP6V0A1-214ENST00000587797 WIZO95785 1651 aa24.4■■□□□ 1.5
ATP6V0A1-214ENST00000587797 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
ATP6V0A1-214ENST00000587797 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
ATP6V0A1-214ENST00000587797 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
ATP6V0A1-214ENST00000587797 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
ATP6V0A1-214ENST00000587797 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
ATP6V0A1-214ENST00000587797 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
ATP6V0A1-214ENST00000587797 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
ATP6V0A1-214ENST00000587797 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
ATP6V0A1-214ENST00000587797 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
ATP6V0A1-214ENST00000587797 CCDC88BA6NC98 1476 aa23.93■■□□□ 1.42
ATP6V0A1-214ENST00000587797 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
ATP6V0A1-214ENST00000587797 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
ATP6V0A1-214ENST00000587797 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
ATP6V0A1-214ENST00000587797 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
ATP6V0A1-214ENST00000587797 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
ATP6V0A1-214ENST00000587797 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
ATP6V0A1-214ENST00000587797 EEA1Q15075 1411 aa23.61■■□□□ 1.37
ATP6V0A1-214ENST00000587797 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.375e-7■□□□□ 10.9
ATP6V0A1-214ENST00000587797 WRNQ14191 1432 aaPredicted RBP eCLIP23.53■■□□□ 1.36
ATP6V0A1-214ENST00000587797 SOGA1O94964 1423 aa23.52■■□□□ 1.35
ATP6V0A1-214ENST00000587797 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
ATP6V0A1-214ENST00000587797 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
ATP6V0A1-214ENST00000587797 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
ATP6V0A1-214ENST00000587797 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
ATP6V0A1-214ENST00000587797 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
ATP6V0A1-214ENST00000587797 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.34
ATP6V0A1-214ENST00000587797 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
ATP6V0A1-214ENST00000587797 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
ATP6V0A1-214ENST00000587797 KIF21BO75037 1637 aa23.29■■□□□ 1.32
ATP6V0A1-214ENST00000587797 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
ATP6V0A1-214ENST00000587797 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
ATP6V0A1-214ENST00000587797 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
ATP6V0A1-214ENST00000587797 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
ATP6V0A1-214ENST00000587797 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
ATP6V0A1-214ENST00000587797 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
ATP6V0A1-214ENST00000587797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
ATP6V0A1-214ENST00000587797 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
ATP6V0A1-214ENST00000587797 CLIP1P30622 1438 aa23.01■■□□□ 1.27
ATP6V0A1-214ENST00000587797 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
ATP6V0A1-214ENST00000587797 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
ATP6V0A1-214ENST00000587797 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
ATP6V0A1-214ENST00000587797 CFTRP13569 1480 aa22.89■■□□□ 1.25
ATP6V0A1-214ENST00000587797 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
ATP6V0A1-214ENST00000587797 CUX1P39880 1505 aa22.88■■□□□ 1.25
ATP6V0A1-214ENST00000587797 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
ATP6V0A1-214ENST00000587797 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
ATP6V0A1-214ENST00000587797 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
ATP6V0A1-214ENST00000587797 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
ATP6V0A1-214ENST00000587797 APLP2Q06481 763 aa22.67■■□□□ 1.22
ATP6V0A1-214ENST00000587797 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
ATP6V0A1-214ENST00000587797 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
ATP6V0A1-214ENST00000587797 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
ATP6V0A1-214ENST00000587797 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
ATP6V0A1-214ENST00000587797 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
ATP6V0A1-214ENST00000587797 CUX2O14529 1486 aa22.5■■□□□ 1.19
ATP6V0A1-214ENST00000587797 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
ATP6V0A1-214ENST00000587797 ZNF316A6NFI3 1004 aaPredicted RBP22.48■■□□□ 1.19
ATP6V0A1-214ENST00000587797 IGF1RP08069 1367 aa22.48■■□□□ 1.19
ATP6V0A1-214ENST00000587797 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
ATP6V0A1-214ENST00000587797 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
ATP6V0A1-214ENST00000587797 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
ATP6V0A1-214ENST00000587797 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
ATP6V0A1-214ENST00000587797 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
ATP6V0A1-214ENST00000587797 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
ATP6V0A1-214ENST00000587797 MAP3K1Q13233 1512 aa22.39■■□□□ 1.17
ATP6V0A1-214ENST00000587797 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
ATP6V0A1-214ENST00000587797 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
ATP6V0A1-214ENST00000587797 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
ATP6V0A1-214ENST00000587797 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
ATP6V0A1-214ENST00000587797 DHX57Q6P158 1386 aaKnown RBP22.32■■□□□ 1.16
ATP6V0A1-214ENST00000587797 TIAM1Q13009 1591 aa22.3■■□□□ 1.16
ATP6V0A1-214ENST00000587797 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
ATP6V0A1-214ENST00000587797 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
ATP6V0A1-214ENST00000587797 CENPBP07199 599 aaPredicted RBP22.26■■□□□ 1.15
ATP6V0A1-214ENST00000587797 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
ATP6V0A1-214ENST00000587797 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
ATP6V0A1-214ENST00000587797 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
ATP6V0A1-214ENST00000587797 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
ATP6V0A1-214ENST00000587797 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
ATP6V0A1-214ENST00000587797 CUL7Q14999 1698 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms