RNA–Protein interactions for RNA: ENST00000585708.5

CACNA2D4-219, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-219ENST00000585708 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
CACNA2D4-219ENST00000585708 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
CACNA2D4-219ENST00000585708 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
CACNA2D4-219ENST00000585708 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
CACNA2D4-219ENST00000585708 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
CACNA2D4-219ENST00000585708 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
CACNA2D4-219ENST00000585708 ABCC9O60706 1549 aa19.22■□□□□ 0.67
CACNA2D4-219ENST00000585708 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
CACNA2D4-219ENST00000585708 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
CACNA2D4-219ENST00000585708 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
CACNA2D4-219ENST00000585708 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.61
CACNA2D4-219ENST00000585708 PELP1Q8IZL8 1130 aaKnown RBP18.77■□□□□ 0.6
CACNA2D4-219ENST00000585708 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
CACNA2D4-219ENST00000585708 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
CACNA2D4-219ENST00000585708 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
CACNA2D4-219ENST00000585708 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
CACNA2D4-219ENST00000585708 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
CACNA2D4-219ENST00000585708 NACADO15069 1562 aa18.57■□□□□ 0.56
CACNA2D4-219ENST00000585708 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.55
CACNA2D4-219ENST00000585708 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
CACNA2D4-219ENST00000585708 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
CACNA2D4-219ENST00000585708 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
CACNA2D4-219ENST00000585708 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
CACNA2D4-219ENST00000585708 WIZO95785 1651 aa18.29■□□□□ 0.52
CACNA2D4-219ENST00000585708 MYT1Q01538 1121 aa18.28■□□□□ 0.52
CACNA2D4-219ENST00000585708 HRCP23327 699 aa18.1■□□□□ 0.49
CACNA2D4-219ENST00000585708 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
CACNA2D4-219ENST00000585708 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.48
CACNA2D4-219ENST00000585708 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
CACNA2D4-219ENST00000585708 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
CACNA2D4-219ENST00000585708 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.47
CACNA2D4-219ENST00000585708 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
CACNA2D4-219ENST00000585708 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
CACNA2D4-219ENST00000585708 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
CACNA2D4-219ENST00000585708 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
CACNA2D4-219ENST00000585708 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
CACNA2D4-219ENST00000585708 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
CACNA2D4-219ENST00000585708 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.44
CACNA2D4-219ENST00000585708 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-219ENST00000585708 SOGA1O94964 1423 aa17.72■□□□□ 0.43
CACNA2D4-219ENST00000585708 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
CACNA2D4-219ENST00000585708 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
CACNA2D4-219ENST00000585708 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
CACNA2D4-219ENST00000585708 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.42
CACNA2D4-219ENST00000585708 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
CACNA2D4-219ENST00000585708 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
CACNA2D4-219ENST00000585708 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
CACNA2D4-219ENST00000585708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
CACNA2D4-219ENST00000585708 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
CACNA2D4-219ENST00000585708 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
CACNA2D4-219ENST00000585708 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
CACNA2D4-219ENST00000585708 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
CACNA2D4-219ENST00000585708 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
CACNA2D4-219ENST00000585708 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
CACNA2D4-219ENST00000585708 EEA1Q15075 1411 aa17.3■□□□□ 0.36
CACNA2D4-219ENST00000585708 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CACNA2D4-219ENST00000585708 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
CACNA2D4-219ENST00000585708 APLP2Q06481 763 aa17.27■□□□□ 0.36
CACNA2D4-219ENST00000585708 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
CACNA2D4-219ENST00000585708 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
CACNA2D4-219ENST00000585708 CLIP1P30622 1438 aa17.22■□□□□ 0.35
CACNA2D4-219ENST00000585708 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
CACNA2D4-219ENST00000585708 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
CACNA2D4-219ENST00000585708 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
CACNA2D4-219ENST00000585708 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
CACNA2D4-219ENST00000585708 CUX1P39880 1505 aa17.11■□□□□ 0.33
CACNA2D4-219ENST00000585708 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
CACNA2D4-219ENST00000585708 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
CACNA2D4-219ENST00000585708 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.33
CACNA2D4-219ENST00000585708 CFTRP13569 1480 aa17.08■□□□□ 0.32
CACNA2D4-219ENST00000585708 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
CACNA2D4-219ENST00000585708 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
CACNA2D4-219ENST00000585708 CADPSQ9ULU8 1353 aa17.05■□□□□ 0.32
CACNA2D4-219ENST00000585708 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
CACNA2D4-219ENST00000585708 ITGAEP38570 1179 aa17.04■□□□□ 0.32
CACNA2D4-219ENST00000585708 KIF21BO75037 1637 aa17.03■□□□□ 0.32
CACNA2D4-219ENST00000585708 CUX2O14529 1486 aa17.02■□□□□ 0.31
CACNA2D4-219ENST00000585708 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
CACNA2D4-219ENST00000585708 NESP48681 1621 aa17■□□□□ 0.31
CACNA2D4-219ENST00000585708 KANK4Q5T7N3 995 aaPredicted RBP16.99■□□□□ 0.31
CACNA2D4-219ENST00000585708 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
CACNA2D4-219ENST00000585708 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
CACNA2D4-219ENST00000585708 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
CACNA2D4-219ENST00000585708 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
CACNA2D4-219ENST00000585708 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
CACNA2D4-219ENST00000585708 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
CACNA2D4-219ENST00000585708 FANCD2Q9BXW9 1451 aa16.91■□□□□ 0.3
CACNA2D4-219ENST00000585708 IGF1RP08069 1367 aa16.89■□□□□ 0.3
CACNA2D4-219ENST00000585708 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
CACNA2D4-219ENST00000585708 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
CACNA2D4-219ENST00000585708 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
CACNA2D4-219ENST00000585708 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
CACNA2D4-219ENST00000585708 DIEXFQ68CQ4 756 aaKnown RBP16.8■□□□□ 0.28
CACNA2D4-219ENST00000585708 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
CACNA2D4-219ENST00000585708 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
CACNA2D4-219ENST00000585708 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.27
CACNA2D4-219ENST00000585708 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
CACNA2D4-219ENST00000585708 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
CACNA2D4-219ENST00000585708 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
CACNA2D4-219ENST00000585708 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms