RNA–Protein interactions for RNA: ENST00000585708.5

CACNA2D4-219, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-219ENST00000585708 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.561e-30■■■■■ 106.9
CACNA2D4-219ENST00000585708 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.043e-9■■■■■ 101.8
CACNA2D4-219ENST00000585708 RBFOX2O43251 390 aaKnown RBP eCLIP9.34□□□□□ -0.918e-8■■■■■ 84.8
CACNA2D4-219ENST00000585708 SLBPQ14493 270 aaKnown RBP eCLIP10.9□□□□□ -0.668e-12■■■■■ 57.7
CACNA2D4-219ENST00000585708 TRA2AQ13595 282 aaKnown RBP eCLIP10□□□□□ -0.814e-10■■■■■ 54.9
CACNA2D4-219ENST00000585708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■■■ 39.7
CACNA2D4-219ENST00000585708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.947e-7■■■■■ 33.7
CACNA2D4-219ENST00000585708 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.15□□□□□ -0.634e-7■■■■■ 32.3
CACNA2D4-219ENST00000585708 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.291e-10■■■■■ 30.1
CACNA2D4-219ENST00000585708 SF3A3Q12874 501 aaKnown RBP eCLIP12.15□□□□□ -0.465e-7■■■■■ 27.9
CACNA2D4-219ENST00000585708 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■■□ 25.8
CACNA2D4-219ENST00000585708 EFTUD2Q15029 972 aaKnown RBP eCLIP11.83□□□□□ -0.529e-7■■■■□ 25.7
CACNA2D4-219ENST00000585708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.38e-8■■■■□ 25.3
CACNA2D4-219ENST00000585708 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■■□ 25
CACNA2D4-219ENST00000585708 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■■■■□ 24.9
CACNA2D4-219ENST00000585708 MATR3P43243 847 aaKnown RBP eCLIP12.49□□□□□ -0.416e-6■■■■□ 21.9
CACNA2D4-219ENST00000585708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■■□ 21.8
CACNA2D4-219ENST00000585708 NCBP2P52298 156 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■■□□ 19
CACNA2D4-219ENST00000585708 HNRNPLP14866 589 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■□□ 18.9
CACNA2D4-219ENST00000585708 SMNDC1O75940 238 aaKnown RBP eCLIP12.03□□□□□ -0.484e-7■■■□□ 17.2
CACNA2D4-219ENST00000585708 SF3B4Q15427 424 aaKnown RBP eCLIP11.29□□□□□ -0.62e-11■■■□□ 16.3
CACNA2D4-219ENST00000585708 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.14□□□□□ -0.471e-11■■■□□ 16.1
CACNA2D4-219ENST00000585708 SRSF1Q07955 248 aaKnown RBP eCLIP8.73□□□□□ -1.014e-9■■■□□ 15.5
CACNA2D4-219ENST00000585708 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.46e-7■■■□□ 14.8
CACNA2D4-219ENST00000585708 PPIGQ13427 754 aaKnown RBP eCLIP10.92□□□□□ -0.661e-9■■■□□ 14.6
CACNA2D4-219ENST00000585708 PCBP2Q15366 365 aaKnown RBP eCLIP11.02□□□□□ -0.653e-6■■■□□ 14.6
CACNA2D4-219ENST00000585708 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.61e-6■■□□□ 13.5
CACNA2D4-219ENST00000585708 PRPF4O43172 522 aaKnown RBP eCLIP11.61□□□□□ -0.551e-7■□□□□ 11.2
CACNA2D4-219ENST00000585708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.157e-7■□□□□ 10.9
CACNA2D4-219ENST00000585708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.127e-9■□□□□ 9.3
CACNA2D4-219ENST00000585708 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.57□□□□□ -0.564e-6■□□□□ 8.2
Retrieved 31 of 31 RNA–protein pairs in 24.3 ms