RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 NISCHQ9Y2I1 1504 aa33.51■■■□□ 2.95
TVP23C-210ENST00000584811 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.18
TVP23C-210ENST00000584811 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
TVP23C-210ENST00000584811 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
TVP23C-210ENST00000584811 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
TVP23C-210ENST00000584811 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
TVP23C-210ENST00000584811 DCAF1Q9Y4B6 1507 aa27.33■■□□□ 1.97
TVP23C-210ENST00000584811 ABCC9O60706 1549 aa26.97■■□□□ 1.91
TVP23C-210ENST00000584811 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
TVP23C-210ENST00000584811 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
TVP23C-210ENST00000584811 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
TVP23C-210ENST00000584811 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
TVP23C-210ENST00000584811 NACADO15069 1562 aa26.44■■□□□ 1.82
TVP23C-210ENST00000584811 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
TVP23C-210ENST00000584811 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
TVP23C-210ENST00000584811 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
TVP23C-210ENST00000584811 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
TVP23C-210ENST00000584811 WIZO95785 1651 aa25.96■■□□□ 1.75
TVP23C-210ENST00000584811 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
TVP23C-210ENST00000584811 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
TVP23C-210ENST00000584811 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.73
TVP23C-210ENST00000584811 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
TVP23C-210ENST00000584811 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
TVP23C-210ENST00000584811 EHMT2Q96KQ7 1210 aa25.77■■□□□ 1.72
TVP23C-210ENST00000584811 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
TVP23C-210ENST00000584811 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
TVP23C-210ENST00000584811 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
TVP23C-210ENST00000584811 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
TVP23C-210ENST00000584811 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
TVP23C-210ENST00000584811 HRCP23327 699 aa25.43■■□□□ 1.66
TVP23C-210ENST00000584811 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
TVP23C-210ENST00000584811 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
TVP23C-210ENST00000584811 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
TVP23C-210ENST00000584811 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.63
TVP23C-210ENST00000584811 TRIM26Q12899 539 aaPredicted RBP25.2■■□□□ 1.62
TVP23C-210ENST00000584811 SOGA1O94964 1423 aa25.05■■□□□ 1.6
TVP23C-210ENST00000584811 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
TVP23C-210ENST00000584811 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
TVP23C-210ENST00000584811 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
TVP23C-210ENST00000584811 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
TVP23C-210ENST00000584811 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
TVP23C-210ENST00000584811 TTBK1Q5TCY1 1321 aaPredicted RBP24.82■■□□□ 1.56
TVP23C-210ENST00000584811 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
TVP23C-210ENST00000584811 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
TVP23C-210ENST00000584811 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
TVP23C-210ENST00000584811 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
TVP23C-210ENST00000584811 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
TVP23C-210ENST00000584811 EEA1Q15075 1411 aa24.58■■□□□ 1.53
TVP23C-210ENST00000584811 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
TVP23C-210ENST00000584811 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
TVP23C-210ENST00000584811 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
TVP23C-210ENST00000584811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
TVP23C-210ENST00000584811 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
TVP23C-210ENST00000584811 RAPGEF2Q9Y4G8 1499 aa24.41■■□□□ 1.5
TVP23C-210ENST00000584811 CEP164Q9UPV0 1460 aa24.39■■□□□ 1.5
TVP23C-210ENST00000584811 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
TVP23C-210ENST00000584811 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
TVP23C-210ENST00000584811 CUX1P39880 1505 aa24.32■■□□□ 1.48
TVP23C-210ENST00000584811 KIF21BO75037 1637 aa24.31■■□□□ 1.48
TVP23C-210ENST00000584811 CFTRP13569 1480 aa24.29■■□□□ 1.48
TVP23C-210ENST00000584811 CLIP1P30622 1438 aa24.29■■□□□ 1.48
TVP23C-210ENST00000584811 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
TVP23C-210ENST00000584811 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
TVP23C-210ENST00000584811 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
TVP23C-210ENST00000584811 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
TVP23C-210ENST00000584811 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
TVP23C-210ENST00000584811 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
TVP23C-210ENST00000584811 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
TVP23C-210ENST00000584811 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
TVP23C-210ENST00000584811 APLP2Q06481 763 aa24■■□□□ 1.43
TVP23C-210ENST00000584811 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
TVP23C-210ENST00000584811 CUX2O14529 1486 aa23.98■■□□□ 1.43
TVP23C-210ENST00000584811 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
TVP23C-210ENST00000584811 NESP48681 1621 aa23.97■■□□□ 1.43
TVP23C-210ENST00000584811 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
TVP23C-210ENST00000584811 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
TVP23C-210ENST00000584811 IGF1RP08069 1367 aa23.92■■□□□ 1.42
TVP23C-210ENST00000584811 KANK4Q5T7N3 995 aaPredicted RBP23.91■■□□□ 1.42
TVP23C-210ENST00000584811 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
TVP23C-210ENST00000584811 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
TVP23C-210ENST00000584811 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
TVP23C-210ENST00000584811 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
TVP23C-210ENST00000584811 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
TVP23C-210ENST00000584811 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
TVP23C-210ENST00000584811 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
TVP23C-210ENST00000584811 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
TVP23C-210ENST00000584811 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
TVP23C-210ENST00000584811 ITGAEP38570 1179 aa23.61■■□□□ 1.37
TVP23C-210ENST00000584811 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
TVP23C-210ENST00000584811 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
TVP23C-210ENST00000584811 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
TVP23C-210ENST00000584811 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
TVP23C-210ENST00000584811 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
TVP23C-210ENST00000584811 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
TVP23C-210ENST00000584811 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
TVP23C-210ENST00000584811 RRBP1Q9P2E9 1410 aaKnown RBP23.47■■□□□ 1.35
TVP23C-210ENST00000584811 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
TVP23C-210ENST00000584811 ZNF316A6NFI3 1004 aaPredicted RBP23.44■■□□□ 1.34
TVP23C-210ENST00000584811 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
TVP23C-210ENST00000584811 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms